Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
SHANK2Q9UPX8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC34.86■■■■□ 3.17
SHANK2Q9UPX8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
SHANK2Q9UPX8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
SHANK2Q9UPX8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 SRD5A1P1-201ENST00000442297 786 ntBASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 AC005703.6-201ENST00000623265 1329 ntBASIC34.85■■■■□ 3.17
SHANK2Q9UPX8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
SHANK2Q9UPX8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
SHANK2Q9UPX8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
SHANK2Q9UPX8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC34.83■■■■□ 3.17
SHANK2Q9UPX8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC34.83■■■■□ 3.17
SHANK2Q9UPX8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
SHANK2Q9UPX8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
SHANK2Q9UPX8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
SHANK2Q9UPX8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
SHANK2Q9UPX8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
SHANK2Q9UPX8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC34.81■■■■□ 3.16
SHANK2Q9UPX8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SHANK2Q9UPX8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SHANK2Q9UPX8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC34.81■■■■□ 3.16
SHANK2Q9UPX8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC34.81■■■■□ 3.16
SHANK2Q9UPX8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC34.81■■■■□ 3.16
SHANK2Q9UPX8 AC135279.3-201ENST00000610945 1311 ntBASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 SUDS3P1-201ENST00000505831 966 ntBASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
SHANK2Q9UPX8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SHANK2Q9UPX8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SHANK2Q9UPX8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC34.79■■■■□ 3.16
SHANK2Q9UPX8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC34.79■■■■□ 3.16
SHANK2Q9UPX8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SHANK2Q9UPX8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SHANK2Q9UPX8 AL136162.1-201ENST00000607711 1078 ntBASIC34.78■■■■□ 3.16
SHANK2Q9UPX8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC34.78■■■■□ 3.16
SHANK2Q9UPX8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
SHANK2Q9UPX8 UNC93B3-201ENST00000308076 687 ntBASIC34.77■■■■□ 3.16
SHANK2Q9UPX8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.15
SHANK2Q9UPX8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
SHANK2Q9UPX8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
SHANK2Q9UPX8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC34.76■■■■□ 3.15
SHANK2Q9UPX8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 SF1-220ENST00000626028 704 ntTSL 2 BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
SHANK2Q9UPX8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
SHANK2Q9UPX8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC34.74■■■■□ 3.15
SHANK2Q9UPX8 AC024257.2-201ENST00000549699 147 ntBASIC34.74■■■■□ 3.15
SHANK2Q9UPX8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
SHANK2Q9UPX8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC34.73■■■■□ 3.15
SHANK2Q9UPX8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 AC145676.1-201ENST00000514988 2004 ntBASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 PBX2P1-201ENST00000493219 1291 ntBASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 AC091060.1-201ENST00000623524 1766 ntBASIC34.72■■■■□ 3.15
SHANK2Q9UPX8 EDA-201ENST00000338901 1233 ntBASIC34.71■■■■□ 3.15
SHANK2Q9UPX8 MIR5787-201ENST00000611784 55 ntBASIC34.71■■■■□ 3.15
SHANK2Q9UPX8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
SHANK2Q9UPX8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
SHANK2Q9UPX8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
SHANK2Q9UPX8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC34.71■■■■□ 3.15
SHANK2Q9UPX8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC34.71■■■■□ 3.15
SHANK2Q9UPX8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 REST-206ENST00000612429 1376 ntTSL 5 BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 REST-207ENST00000616975 1370 ntTSL 5 BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC34.7■■■■□ 3.15
SHANK2Q9UPX8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC34.69■■■■□ 3.14
SHANK2Q9UPX8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
SHANK2Q9UPX8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC34.69■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms