Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
DUX4Q9UBX2 DUX4L9-201ENST00000449051 1259 ntBASIC20.08■□□□□ 0.81
DUX4Q9UBX2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.08■□□□□ 0.81
DUX4Q9UBX2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DUX4Q9UBX2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.08■□□□□ 0.8
DUX4Q9UBX2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
DUX4Q9UBX2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DUX4Q9UBX2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX4Q9UBX2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 AC010501.1-201ENST00000606270 1962 ntBASIC20.06■□□□□ 0.8
DUX4Q9UBX2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.06■□□□□ 0.8
DUX4Q9UBX2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.05■□□□□ 0.8
DUX4Q9UBX2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 DUX4L18-201ENST00000553347 1267 ntBASIC20.04■□□□□ 0.8
DUX4Q9UBX2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
DUX4Q9UBX2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 AC004987.1-201ENST00000428627 508 ntBASIC20.03■□□□□ 0.8
DUX4Q9UBX2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DUX4Q9UBX2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DUX4Q9UBX2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DUX4Q9UBX2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
DUX4Q9UBX2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.02■□□□□ 0.8
DUX4Q9UBX2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DUX4Q9UBX2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
DUX4Q9UBX2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DUX4Q9UBX2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUX4Q9UBX2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUX4Q9UBX2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.01■□□□□ 0.79
DUX4Q9UBX2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
DUX4Q9UBX2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
DUX4Q9UBX2 AC012354.3-201ENST00000623734 483 ntBASIC20.01■□□□□ 0.79
DUX4Q9UBX2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
DUX4Q9UBX2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUX4Q9UBX2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DUX4Q9UBX2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
DUX4Q9UBX2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DUX4Q9UBX2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20■□□□□ 0.79
DUX4Q9UBX2 ATP5G2P3-201ENST00000429083 425 ntBASIC20■□□□□ 0.79
DUX4Q9UBX2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DUX4Q9UBX2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20■□□□□ 0.79
DUX4Q9UBX2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DUX4Q9UBX2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DUX4Q9UBX2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20■□□□□ 0.79
DUX4Q9UBX2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 AL033527.3-201ENST00000566366 1196 ntBASIC19.99■□□□□ 0.79
DUX4Q9UBX2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.99■□□□□ 0.79
DUX4Q9UBX2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms