Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
PDLIM7Q9NR12 SLC6A10P-202ENST00000431994 2058 ntBASIC26.13■■□□□ 1.77
PDLIM7Q9NR12 EDA-201ENST00000338901 1233 ntBASIC26.13■■□□□ 1.77
PDLIM7Q9NR12 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.13■■□□□ 1.77
PDLIM7Q9NR12 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PDLIM7Q9NR12 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.12■■□□□ 1.77
PDLIM7Q9NR12 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDLIM7Q9NR12 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 AC105265.2-201ENST00000467189 838 ntBASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 AC024257.2-201ENST00000549699 147 ntBASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 AL355001.2-201ENST00000620617 1191 ntBASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.1■■□□□ 1.77
PDLIM7Q9NR12 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PDLIM7Q9NR12 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDLIM7Q9NR12 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.09■■□□□ 1.77
PDLIM7Q9NR12 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.09■■□□□ 1.77
PDLIM7Q9NR12 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
PDLIM7Q9NR12 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PDLIM7Q9NR12 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDLIM7Q9NR12 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDLIM7Q9NR12 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDLIM7Q9NR12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDLIM7Q9NR12 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDLIM7Q9NR12 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.07■■□□□ 1.76
PDLIM7Q9NR12 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDLIM7Q9NR12 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.06■■□□□ 1.76
PDLIM7Q9NR12 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDLIM7Q9NR12 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.06■■□□□ 1.76
PDLIM7Q9NR12 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.06■■□□□ 1.76
PDLIM7Q9NR12 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.06■■□□□ 1.76
PDLIM7Q9NR12 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDLIM7Q9NR12 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 SNX5-217ENST00000606557 1087 ntBASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDLIM7Q9NR12 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDLIM7Q9NR12 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
PDLIM7Q9NR12 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDLIM7Q9NR12 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.03■■□□□ 1.76
PDLIM7Q9NR12 MIR6722-201ENST00000617286 78 ntBASIC26.03■■□□□ 1.76
PDLIM7Q9NR12 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 SRD5A1P1-201ENST00000442297 786 ntBASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 AF213884.3-201ENST00000563833 479 ntBASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 MIR6821-201ENST00000617625 74 ntBASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 AL136967.2-201ENST00000623968 743 ntBASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 AC090877.2-201ENST00000558441 1738 ntBASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PDLIM7Q9NR12 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDLIM7Q9NR12 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PDLIM7Q9NR12 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.01■■□□□ 1.75
PDLIM7Q9NR12 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDLIM7Q9NR12 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.01■■□□□ 1.75
PDLIM7Q9NR12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDLIM7Q9NR12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDLIM7Q9NR12 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26■■□□□ 1.75
PDLIM7Q9NR12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26■■□□□ 1.75
PDLIM7Q9NR12 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDLIM7Q9NR12 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PDLIM7Q9NR12 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDLIM7Q9NR12 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDLIM7Q9NR12 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26■■□□□ 1.75
PDLIM7Q9NR12 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms