Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 AC060814.1-201ENST00000554326 538 ntBASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 AC141586.4-201ENST00000624558 1573 ntBASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C12orf4Q9NQ89 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 ABCB10P4-201ENST00000566803 2184 ntBASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C12orf4Q9NQ89 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
C12orf4Q9NQ89 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
C12orf4Q9NQ89 SMPD5-203ENST00000639008 1464 ntBASIC19.83■□□□□ 0.76
C12orf4Q9NQ89 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
C12orf4Q9NQ89 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C12orf4Q9NQ89 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C12orf4Q9NQ89 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
C12orf4Q9NQ89 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.81■□□□□ 0.76
C12orf4Q9NQ89 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
C12orf4Q9NQ89 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C12orf4Q9NQ89 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.81■□□□□ 0.76
C12orf4Q9NQ89 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C12orf4Q9NQ89 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C12orf4Q9NQ89 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.81■□□□□ 0.76
C12orf4Q9NQ89 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 AC092296.2-201ENST00000589470 999 ntBASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C12orf4Q9NQ89 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 MIR6089-201ENST00000616698 64 ntBASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C12orf4Q9NQ89 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C12orf4Q9NQ89 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms