Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.81■□□□□ 0.92
KIAA1549Q9HCM3 AL117332.1-201ENST00000622628 974 ntBASIC20.81■□□□□ 0.92
KIAA1549Q9HCM3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KIAA1549Q9HCM3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 AC142381.3-201ENST00000568208 1670 ntBASIC20.8■□□□□ 0.92
KIAA1549Q9HCM3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 AC010997.5-201ENST00000609182 354 ntBASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 MIR6724-1-201ENST00000616420 92 ntBASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 MIR6724-2-201ENST00000616483 92 ntBASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 MIR6724-4-201ENST00000617390 92 ntBASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 MIR6724-3-201ENST00000622482 92 ntBASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 AC131274.2-201ENST00000580697 1507 ntBASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KIAA1549Q9HCM3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.78■□□□□ 0.92
KIAA1549Q9HCM3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.78■□□□□ 0.92
KIAA1549Q9HCM3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 MIR4466-201ENST00000606121 54 ntBASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 AL512631.2-201ENST00000604634 923 ntBASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.77■□□□□ 0.92
KIAA1549Q9HCM3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
KIAA1549Q9HCM3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.75■□□□□ 0.91
KIAA1549Q9HCM3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 AC008406.3-201ENST00000620001 1374 ntBASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.74■□□□□ 0.91
KIAA1549Q9HCM3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KIAA1549Q9HCM3 MIR3621-201ENST00000580529 85 ntBASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.72■□□□□ 0.91
KIAA1549Q9HCM3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms