Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CHD8Q9HCK8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.01■■□□□ 1.11
CHD8Q9HCK8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.01■■□□□ 1.11
CHD8Q9HCK8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHD8Q9HCK8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
CHD8Q9HCK8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHD8Q9HCK8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22■■□□□ 1.11
CHD8Q9HCK8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22■■□□□ 1.11
CHD8Q9HCK8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22■■□□□ 1.11
CHD8Q9HCK8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHD8Q9HCK8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CHD8Q9HCK8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD8Q9HCK8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.99■■□□□ 1.11
CHD8Q9HCK8 AL449106.1-201ENST00000608517 1980 ntBASIC21.99■■□□□ 1.11
CHD8Q9HCK8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD8Q9HCK8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD8Q9HCK8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CHD8Q9HCK8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD8Q9HCK8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.98■■□□□ 1.11
CHD8Q9HCK8 CROCCP5-201ENST00000436658 830 ntBASIC21.98■■□□□ 1.11
CHD8Q9HCK8 AC142086.2-201ENST00000569753 217 ntBASIC21.98■■□□□ 1.11
CHD8Q9HCK8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.98■■□□□ 1.11
CHD8Q9HCK8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD8Q9HCK8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 AC006015.1-201ENST00000429970 570 ntBASIC21.97■■□□□ 1.11
CHD8Q9HCK8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 AL499627.2-201ENST00000606283 725 ntBASIC21.97■■□□□ 1.11
CHD8Q9HCK8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.97■■□□□ 1.11
CHD8Q9HCK8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 AC099791.2-201ENST00000605725 427 ntBASIC21.96■■□□□ 1.11
CHD8Q9HCK8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 KRT18P14-201ENST00000534205 1250 ntBASIC21.96■■□□□ 1.11
CHD8Q9HCK8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.96■■□□□ 1.11
CHD8Q9HCK8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.95■■□□□ 1.11
CHD8Q9HCK8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
CHD8Q9HCK8 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.95■■□□□ 1.11
CHD8Q9HCK8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CHD8Q9HCK8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD8Q9HCK8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHD8Q9HCK8 NCF1B-203ENST00000435988 1254 ntBASIC21.94■■□□□ 1.1
CHD8Q9HCK8 MIR4651-201ENST00000582622 73 ntBASIC21.94■■□□□ 1.1
CHD8Q9HCK8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHD8Q9HCK8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD8Q9HCK8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD8Q9HCK8 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.94■■□□□ 1.1
CHD8Q9HCK8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.94■■□□□ 1.1
CHD8Q9HCK8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 BX842568.3-201ENST00000418104 571 ntBASIC21.93■■□□□ 1.1
CHD8Q9HCK8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.93■■□□□ 1.1
CHD8Q9HCK8 AC092171.4-201ENST00000609130 632 ntBASIC21.93■■□□□ 1.1
CHD8Q9HCK8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.92■■□□□ 1.1
CHD8Q9HCK8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD8Q9HCK8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD8Q9HCK8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD8Q9HCK8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD8Q9HCK8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD8Q9HCK8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CHD8Q9HCK8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD8Q9HCK8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD8Q9HCK8 TSPY26P-201ENST00000476365 1326 ntBASIC21.91■■□□□ 1.1
CHD8Q9HCK8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD8Q9HCK8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD8Q9HCK8 AC073111.5-205ENST00000641717 521 ntBASIC21.91■■□□□ 1.1
CHD8Q9HCK8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD8Q9HCK8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms