Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ZFYVE28Q9HCC9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZFYVE28Q9HCC9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 AC034268.1-201ENST00000441047 882 ntBASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZFYVE28Q9HCC9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZFYVE28Q9HCC9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZFYVE28Q9HCC9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.72■■□□□ 1.87
ZFYVE28Q9HCC9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.72■■□□□ 1.87
ZFYVE28Q9HCC9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.72■■□□□ 1.87
ZFYVE28Q9HCC9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZFYVE28Q9HCC9 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.71■■□□□ 1.87
ZFYVE28Q9HCC9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.71■■□□□ 1.87
ZFYVE28Q9HCC9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
ZFYVE28Q9HCC9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.71■■□□□ 1.87
ZFYVE28Q9HCC9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZFYVE28Q9HCC9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ZFYVE28Q9HCC9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.71■■□□□ 1.87
ZFYVE28Q9HCC9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.7■■□□□ 1.87
ZFYVE28Q9HCC9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
ZFYVE28Q9HCC9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ZFYVE28Q9HCC9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 AC022517.1-201ENST00000592429 346 ntBASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 IKBKGP1-201ENST00000612193 1073 ntBASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 AC097639.1-201ENST00000565519 1891 ntBASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ZFYVE28Q9HCC9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ZFYVE28Q9HCC9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZFYVE28Q9HCC9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZFYVE28Q9HCC9 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.69■■□□□ 1.86
ZFYVE28Q9HCC9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.69■■□□□ 1.86
ZFYVE28Q9HCC9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ZFYVE28Q9HCC9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.69■■□□□ 1.86
ZFYVE28Q9HCC9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 AL137784.2-201ENST00000607332 1000 ntBASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ZFYVE28Q9HCC9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 AC233992.3-201ENST00000607491 485 ntBASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 AC136469.2-201ENST00000623944 1028 ntBASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.67■■□□□ 1.86
ZFYVE28Q9HCC9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ZFYVE28Q9HCC9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
ZFYVE28Q9HCC9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.66■■□□□ 1.86
ZFYVE28Q9HCC9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.66■■□□□ 1.86
ZFYVE28Q9HCC9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.66■■□□□ 1.86
ZFYVE28Q9HCC9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.66■■□□□ 1.86
ZFYVE28Q9HCC9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZFYVE28Q9HCC9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ZFYVE28Q9HCC9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.65■■□□□ 1.86
ZFYVE28Q9HCC9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.65■■□□□ 1.86
ZFYVE28Q9HCC9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
ZFYVE28Q9HCC9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZFYVE28Q9HCC9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
ZFYVE28Q9HCC9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ZFYVE28Q9HCC9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
ZFYVE28Q9HCC9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
ZFYVE28Q9HCC9 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.64■■□□□ 1.86
ZFYVE28Q9HCC9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.64■■□□□ 1.86
ZFYVE28Q9HCC9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.64■■□□□ 1.86
ZFYVE28Q9HCC9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.85
ZFYVE28Q9HCC9 AC009102.2-201ENST00000606772 1639 ntBASIC26.64■■□□□ 1.85
ZFYVE28Q9HCC9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.64■■□□□ 1.85
ZFYVE28Q9HCC9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.63■■□□□ 1.85
ZFYVE28Q9HCC9 AC241377.3-202ENST00000626088 1088 ntBASIC26.63■■□□□ 1.85
ZFYVE28Q9HCC9 AC241585.3-202ENST00000628937 1088 ntBASIC26.63■■□□□ 1.85
ZFYVE28Q9HCC9 AC245100.8-202ENST00000629247 1058 ntBASIC26.63■■□□□ 1.85
ZFYVE28Q9HCC9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZFYVE28Q9HCC9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms