Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SND1-IT1Q9HBX3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SND1-IT1Q9HBX3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.37■□□□□ 0.05
SND1-IT1Q9HBX3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SND1-IT1Q9HBX3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SND1-IT1Q9HBX3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SND1-IT1Q9HBX3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SND1-IT1Q9HBX3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SND1-IT1Q9HBX3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
SND1-IT1Q9HBX3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC15.33■□□□□ 0.05
SND1-IT1Q9HBX3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.33■□□□□ 0.04
SND1-IT1Q9HBX3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SND1-IT1Q9HBX3 AC233723.2-201ENST00000623798 2106 ntBASIC15.32■□□□□ 0.04
SND1-IT1Q9HBX3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SND1-IT1Q9HBX3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.32■□□□□ 0.04
SND1-IT1Q9HBX3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms