Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.64■■□□□ 1.38
LRFN3Q9BTN0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LRFN3Q9BTN0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LRFN3Q9BTN0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.64■■□□□ 1.37
LRFN3Q9BTN0 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.64■■□□□ 1.37
LRFN3Q9BTN0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
LRFN3Q9BTN0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRFN3Q9BTN0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRFN3Q9BTN0 AC026185.1-201ENST00000445748 174 ntBASIC23.63■■□□□ 1.37
LRFN3Q9BTN0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.63■■□□□ 1.37
LRFN3Q9BTN0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
LRFN3Q9BTN0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRFN3Q9BTN0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRFN3Q9BTN0 KRT18P14-201ENST00000534205 1250 ntBASIC23.62■■□□□ 1.37
LRFN3Q9BTN0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRFN3Q9BTN0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRFN3Q9BTN0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.62■■□□□ 1.37
LRFN3Q9BTN0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRFN3Q9BTN0 AC005703.6-201ENST00000623265 1329 ntBASIC23.61■■□□□ 1.37
LRFN3Q9BTN0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.61■■□□□ 1.37
LRFN3Q9BTN0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.61■■□□□ 1.37
LRFN3Q9BTN0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRFN3Q9BTN0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.6■■□□□ 1.37
LRFN3Q9BTN0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.6■■□□□ 1.37
LRFN3Q9BTN0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.6■■□□□ 1.37
LRFN3Q9BTN0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.6■■□□□ 1.37
LRFN3Q9BTN0 MIR6084-201ENST00000622012 110 ntBASIC23.6■■□□□ 1.37
LRFN3Q9BTN0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.6■■□□□ 1.37
LRFN3Q9BTN0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 AC126544.1-201ENST00000580842 1059 ntBASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 TSPY26P-201ENST00000476365 1326 ntBASIC23.59■■□□□ 1.37
LRFN3Q9BTN0 AC006015.1-201ENST00000429970 570 ntBASIC23.58■■□□□ 1.37
LRFN3Q9BTN0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.58■■□□□ 1.36
LRFN3Q9BTN0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.57■■□□□ 1.36
LRFN3Q9BTN0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRFN3Q9BTN0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRFN3Q9BTN0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRFN3Q9BTN0 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.57■■□□□ 1.36
LRFN3Q9BTN0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.57■■□□□ 1.36
LRFN3Q9BTN0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.57■■□□□ 1.36
LRFN3Q9BTN0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRFN3Q9BTN0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 AC006970.2-201ENST00000450065 779 ntBASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.55■■□□□ 1.36
LRFN3Q9BTN0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 TERF1P2-201ENST00000583350 1212 ntBASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRFN3Q9BTN0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 ST7-AS1-201ENST00000456775 1889 ntBASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRFN3Q9BTN0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
LRFN3Q9BTN0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRFN3Q9BTN0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
LRFN3Q9BTN0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.51■■□□□ 1.35
LRFN3Q9BTN0 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.51■■□□□ 1.35
LRFN3Q9BTN0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRFN3Q9BTN0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRFN3Q9BTN0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRFN3Q9BTN0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms