Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GFI1Q99684 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.02■□□□□ 0.8
GFI1Q99684 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
GFI1Q99684 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.02■□□□□ 0.8
GFI1Q99684 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.02■□□□□ 0.8
GFI1Q99684 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1Q99684 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GFI1Q99684 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
GFI1Q99684 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GFI1Q99684 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GFI1Q99684 ANOS2P-203ENST00000472227 1816 ntBASIC20.02■□□□□ 0.79
GFI1Q99684 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
GFI1Q99684 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GFI1Q99684 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.01■□□□□ 0.79
GFI1Q99684 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GFI1Q99684 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.01■□□□□ 0.79
GFI1Q99684 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GFI1Q99684 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GFI1Q99684 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.01■□□□□ 0.79
GFI1Q99684 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
GFI1Q99684 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GFI1Q99684 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GFI1Q99684 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GFI1Q99684 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GFI1Q99684 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
GFI1Q99684 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20■□□□□ 0.79
GFI1Q99684 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GFI1Q99684 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20■□□□□ 0.79
GFI1Q99684 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1Q99684 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1Q99684 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1Q99684 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1Q99684 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1Q99684 RP9P-202ENST00000450133 1212 ntBASIC19.99■□□□□ 0.79
GFI1Q99684 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1Q99684 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1Q99684 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GFI1Q99684 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
GFI1Q99684 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GFI1Q99684 AC093536.1-201ENST00000569153 554 ntBASIC19.98■□□□□ 0.79
GFI1Q99684 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GFI1Q99684 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GFI1Q99684 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
GFI1Q99684 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1Q99684 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.97■□□□□ 0.79
GFI1Q99684 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
GFI1Q99684 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1Q99684 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.97■□□□□ 0.79
GFI1Q99684 DUSP8P3-201ENST00000399571 1760 ntBASIC19.97■□□□□ 0.79
GFI1Q99684 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1Q99684 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.97■□□□□ 0.79
GFI1Q99684 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1Q99684 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1Q99684 LINC00565-201ENST00000562710 2331 ntBASIC19.97■□□□□ 0.79
GFI1Q99684 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1Q99684 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 C1orf229-201ENST00000623686 2258 ntBASIC19.96■□□□□ 0.79
GFI1Q99684 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
GFI1Q99684 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.96■□□□□ 0.79
GFI1Q99684 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.96■□□□□ 0.79
GFI1Q99684 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1Q99684 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.95■□□□□ 0.78
GFI1Q99684 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
GFI1Q99684 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.95■□□□□ 0.78
GFI1Q99684 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
GFI1Q99684 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.95■□□□□ 0.78
GFI1Q99684 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.95■□□□□ 0.78
GFI1Q99684 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.95■□□□□ 0.78
GFI1Q99684 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.95■□□□□ 0.78
GFI1Q99684 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1Q99684 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GFI1Q99684 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
GFI1Q99684 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GFI1Q99684 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.94■□□□□ 0.78
GFI1Q99684 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GFI1Q99684 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.94■□□□□ 0.78
GFI1Q99684 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.94■□□□□ 0.78
GFI1Q99684 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GFI1Q99684 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms