Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL031602.1-201ENST00000633169 911 ntBASIC21.09■□□□□ 0.97
SPENQ96T58 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPENQ96T58 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SPENQ96T58 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.08■□□□□ 0.97
SPENQ96T58 RARRES2P11-201ENST00000635158 484 ntBASIC21.08■□□□□ 0.97
SPENQ96T58 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.08■□□□□ 0.96
SPENQ96T58 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.08■□□□□ 0.96
SPENQ96T58 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPENQ96T58 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.08■□□□□ 0.96
SPENQ96T58 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.07■□□□□ 0.96
SPENQ96T58 IKBKGP1-201ENST00000612193 1073 ntBASIC21.07■□□□□ 0.96
SPENQ96T58 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.07■□□□□ 0.96
SPENQ96T58 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPENQ96T58 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.07■□□□□ 0.96
SPENQ96T58 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPENQ96T58 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPENQ96T58 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPENQ96T58 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.06■□□□□ 0.96
SPENQ96T58 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPENQ96T58 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPENQ96T58 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPENQ96T58 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPENQ96T58 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.06■□□□□ 0.96
SPENQ96T58 AC027682.1-201ENST00000562846 899 ntBASIC21.06■□□□□ 0.96
SPENQ96T58 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
SPENQ96T58 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.06■□□□□ 0.96
SPENQ96T58 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SPENQ96T58 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.06■□□□□ 0.96
SPENQ96T58 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.05■□□□□ 0.96
SPENQ96T58 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPENQ96T58 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.05■□□□□ 0.96
SPENQ96T58 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPENQ96T58 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.05■□□□□ 0.96
SPENQ96T58 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.05■□□□□ 0.96
SPENQ96T58 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPENQ96T58 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPENQ96T58 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.05■□□□□ 0.96
SPENQ96T58 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.05■□□□□ 0.96
SPENQ96T58 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.04■□□□□ 0.96
SPENQ96T58 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPENQ96T58 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPENQ96T58 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPENQ96T58 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPENQ96T58 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPENQ96T58 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SPENQ96T58 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.04■□□□□ 0.96
SPENQ96T58 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.03■□□□□ 0.96
SPENQ96T58 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPENQ96T58 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPENQ96T58 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.03■□□□□ 0.96
SPENQ96T58 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.03■□□□□ 0.96
SPENQ96T58 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPENQ96T58 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPENQ96T58 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SPENQ96T58 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SPENQ96T58 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
SPENQ96T58 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.03■□□□□ 0.96
SPENQ96T58 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPENQ96T58 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPENQ96T58 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPENQ96T58 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.02■□□□□ 0.96
SPENQ96T58 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPENQ96T58 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPENQ96T58 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.02■□□□□ 0.96
SPENQ96T58 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.02■□□□□ 0.96
SPENQ96T58 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPENQ96T58 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPENQ96T58 C17orf82-201ENST00000623772 1530 ntBASIC21.02■□□□□ 0.95
SPENQ96T58 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPENQ96T58 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPENQ96T58 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.01■□□□□ 0.95
SPENQ96T58 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPENQ96T58 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.01■□□□□ 0.95
SPENQ96T58 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SPENQ96T58 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPENQ96T58 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPENQ96T58 SERBP1P1-201ENST00000396021 1160 ntBASIC21.01■□□□□ 0.95
SPENQ96T58 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.01■□□□□ 0.95
SPENQ96T58 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21■□□□□ 0.95
SPENQ96T58 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21■□□□□ 0.95
SPENQ96T58 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21■□□□□ 0.95
SPENQ96T58 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPENQ96T58 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPENQ96T58 CA15P2-201ENST00000611168 834 ntBASIC21■□□□□ 0.95
SPENQ96T58 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21■□□□□ 0.95
SPENQ96T58 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21■□□□□ 0.95
SPENQ96T58 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPENQ96T58 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPENQ96T58 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms