Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.31■□□□□ 0.84
NEDD4LQ96PU5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4LQ96PU5 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.29■□□□□ 0.84
NEDD4LQ96PU5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4LQ96PU5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4LQ96PU5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
NEDD4LQ96PU5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4LQ96PU5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4LQ96PU5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.28■□□□□ 0.84
NEDD4LQ96PU5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEDD4LQ96PU5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEDD4LQ96PU5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEDD4LQ96PU5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEDD4LQ96PU5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.27■□□□□ 0.84
NEDD4LQ96PU5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NEDD4LQ96PU5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NEDD4LQ96PU5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 AC137767.1-201ENST00000602918 1920 ntBASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 CR559946.2-201ENST00000623684 991 ntBASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4LQ96PU5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4LQ96PU5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4LQ96PU5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4LQ96PU5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NEDD4LQ96PU5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4LQ96PU5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4LQ96PU5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD4LQ96PU5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 LINC00526-201ENST00000581067 1875 ntBASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4LQ96PU5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.22■□□□□ 0.83
NEDD4LQ96PU5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms