Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DUX3Q96PT4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DUX3Q96PT4 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.89■□□□□ 0.45
DUX3Q96PT4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.89■□□□□ 0.45
DUX3Q96PT4 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.89■□□□□ 0.45
DUX3Q96PT4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.89■□□□□ 0.45
DUX3Q96PT4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.89■□□□□ 0.45
DUX3Q96PT4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DUX3Q96PT4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DUX3Q96PT4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DUX3Q96PT4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 AC131281.2-201ENST00000520478 145 ntBASIC17.88■□□□□ 0.45
DUX3Q96PT4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
DUX3Q96PT4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DUX3Q96PT4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DUX3Q96PT4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.88■□□□□ 0.45
DUX3Q96PT4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DUX3Q96PT4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
DUX3Q96PT4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.87■□□□□ 0.45
DUX3Q96PT4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 SNX5-217ENST00000606557 1087 ntBASIC17.87■□□□□ 0.45
DUX3Q96PT4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.87■□□□□ 0.45
DUX3Q96PT4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.87■□□□□ 0.45
DUX3Q96PT4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DUX3Q96PT4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
DUX3Q96PT4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.86■□□□□ 0.45
DUX3Q96PT4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.86■□□□□ 0.45
DUX3Q96PT4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DUX3Q96PT4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DUX3Q96PT4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DUX3Q96PT4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.85■□□□□ 0.45
DUX3Q96PT4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DUX3Q96PT4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DUX3Q96PT4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DUX3Q96PT4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DUX3Q96PT4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DUX3Q96PT4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.84■□□□□ 0.45
DUX3Q96PT4 AL136116.3-201ENST00000402907 1138 ntBASIC17.84■□□□□ 0.45
DUX3Q96PT4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.84■□□□□ 0.45
DUX3Q96PT4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.84■□□□□ 0.45
DUX3Q96PT4 AL356740.2-201ENST00000601559 647 ntBASIC17.84■□□□□ 0.45
DUX3Q96PT4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.84■□□□□ 0.45
DUX3Q96PT4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DUX3Q96PT4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DUX3Q96PT4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DUX3Q96PT4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.83■□□□□ 0.45
DUX3Q96PT4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DUX3Q96PT4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DUX3Q96PT4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.83■□□□□ 0.44
DUX3Q96PT4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.83■□□□□ 0.44
DUX3Q96PT4 MIR3621-201ENST00000580529 85 ntBASIC17.83■□□□□ 0.44
DUX3Q96PT4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
DUX3Q96PT4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DUX3Q96PT4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DUX3Q96PT4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DUX3Q96PT4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DUX3Q96PT4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX3Q96PT4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.82■□□□□ 0.44
DUX3Q96PT4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DUX3Q96PT4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms