Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
NBPF4Q96M43 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NBPF4Q96M43 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.81■■■□□ 2.52
NBPF4Q96M43 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
NBPF4Q96M43 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.81■■■□□ 2.52
NBPF4Q96M43 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NBPF4Q96M43 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NBPF4Q96M43 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF4Q96M43 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF4Q96M43 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF4Q96M43 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF4Q96M43 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.8■■■□□ 2.52
NBPF4Q96M43 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF4Q96M43 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NBPF4Q96M43 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
NBPF4Q96M43 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
NBPF4Q96M43 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.79■■■□□ 2.52
NBPF4Q96M43 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.79■■■□□ 2.52
NBPF4Q96M43 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.79■■■□□ 2.52
NBPF4Q96M43 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.79■■■□□ 2.52
NBPF4Q96M43 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NBPF4Q96M43 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
NBPF4Q96M43 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
NBPF4Q96M43 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
NBPF4Q96M43 AC005703.6-201ENST00000623265 1329 ntBASIC30.78■■■□□ 2.52
NBPF4Q96M43 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NBPF4Q96M43 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
NBPF4Q96M43 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.77■■■□□ 2.52
NBPF4Q96M43 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
NBPF4Q96M43 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
NBPF4Q96M43 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.76■■■□□ 2.52
NBPF4Q96M43 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NBPF4Q96M43 EDA-201ENST00000338901 1233 ntBASIC30.76■■■□□ 2.51
NBPF4Q96M43 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
NBPF4Q96M43 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
NBPF4Q96M43 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
NBPF4Q96M43 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.76■■■□□ 2.51
NBPF4Q96M43 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NBPF4Q96M43 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NBPF4Q96M43 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NBPF4Q96M43 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NBPF4Q96M43 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
NBPF4Q96M43 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.75■■■□□ 2.51
NBPF4Q96M43 RARRES2P6-201ENST00000567333 442 ntBASIC30.75■■■□□ 2.51
NBPF4Q96M43 AL355001.2-201ENST00000620617 1191 ntBASIC30.75■■■□□ 2.51
NBPF4Q96M43 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NBPF4Q96M43 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
NBPF4Q96M43 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NBPF4Q96M43 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NBPF4Q96M43 AC026271.2-201ENST00000428091 497 ntBASIC30.74■■■□□ 2.51
NBPF4Q96M43 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.74■■■□□ 2.51
NBPF4Q96M43 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.74■■■□□ 2.51
NBPF4Q96M43 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NBPF4Q96M43 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
NBPF4Q96M43 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.73■■■□□ 2.51
NBPF4Q96M43 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
NBPF4Q96M43 AL136967.2-201ENST00000623968 743 ntBASIC30.73■■■□□ 2.51
NBPF4Q96M43 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.73■■■□□ 2.51
NBPF4Q96M43 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.73■■■□□ 2.51
NBPF4Q96M43 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NBPF4Q96M43 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
NBPF4Q96M43 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.72■■■□□ 2.51
NBPF4Q96M43 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
NBPF4Q96M43 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
NBPF4Q96M43 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.72■■■□□ 2.51
NBPF4Q96M43 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.72■■■□□ 2.51
NBPF4Q96M43 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NBPF4Q96M43 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.72■■■□□ 2.51
NBPF4Q96M43 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF4Q96M43 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF4Q96M43 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF4Q96M43 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
NBPF4Q96M43 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.71■■■□□ 2.51
NBPF4Q96M43 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF4Q96M43 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF4Q96M43 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.71■■■□□ 2.51
NBPF4Q96M43 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NBPF4Q96M43 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
NBPF4Q96M43 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NBPF4Q96M43 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
NBPF4Q96M43 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.7■■■□□ 2.5
NBPF4Q96M43 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NBPF4Q96M43 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
NBPF4Q96M43 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.69■■■□□ 2.5
NBPF4Q96M43 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NBPF4Q96M43 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
NBPF4Q96M43 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
NBPF4Q96M43 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
NBPF4Q96M43 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NBPF4Q96M43 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
NBPF4Q96M43 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC30.68■■■□□ 2.5
NBPF4Q96M43 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NBPF4Q96M43 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
NBPF4Q96M43 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
NBPF4Q96M43 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
NBPF4Q96M43 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
NBPF4Q96M43 AF213884.3-201ENST00000563833 479 ntBASIC30.67■■■□□ 2.5
NBPF4Q96M43 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.67■■■□□ 2.5
NBPF4Q96M43 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
NBPF4Q96M43 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms