Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.37■■□□□ 1.97
DDX11Q96FC9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.37■■□□□ 1.97
DDX11Q96FC9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.36■■□□□ 1.97
DDX11Q96FC9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
DDX11Q96FC9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX11Q96FC9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.36■■□□□ 1.97
DDX11Q96FC9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.35■■□□□ 1.97
DDX11Q96FC9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX11Q96FC9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.35■■□□□ 1.97
DDX11Q96FC9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX11Q96FC9 MIR6089-201ENST00000616698 64 ntBASIC27.35■■□□□ 1.97
DDX11Q96FC9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
DDX11Q96FC9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX11Q96FC9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX11Q96FC9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX11Q96FC9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 AC137630.3-201ENST00000607245 391 ntBASIC27.34■■□□□ 1.97
DDX11Q96FC9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.34■■□□□ 1.97
DDX11Q96FC9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX11Q96FC9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
DDX11Q96FC9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.33■■□□□ 1.97
DDX11Q96FC9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.33■■□□□ 1.97
DDX11Q96FC9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX11Q96FC9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
DDX11Q96FC9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
DDX11Q96FC9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX11Q96FC9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX11Q96FC9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX11Q96FC9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.32■■□□□ 1.96
DDX11Q96FC9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
DDX11Q96FC9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
DDX11Q96FC9 UNC93B8-201ENST00000511903 705 ntBASIC27.32■■□□□ 1.96
DDX11Q96FC9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX11Q96FC9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX11Q96FC9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
DDX11Q96FC9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
DDX11Q96FC9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
DDX11Q96FC9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.31■■□□□ 1.96
DDX11Q96FC9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC27.31■■□□□ 1.96
DDX11Q96FC9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
DDX11Q96FC9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.3■■□□□ 1.96
DDX11Q96FC9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
DDX11Q96FC9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX11Q96FC9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX11Q96FC9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX11Q96FC9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.3■■□□□ 1.96
DDX11Q96FC9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.3■■□□□ 1.96
DDX11Q96FC9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX11Q96FC9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.3■■□□□ 1.96
DDX11Q96FC9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX11Q96FC9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.29■■□□□ 1.96
DDX11Q96FC9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 KRT16P3-201ENST00000439127 1283 ntBASIC27.29■■□□□ 1.96
DDX11Q96FC9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.29■■□□□ 1.96
DDX11Q96FC9 AC008406.3-201ENST00000620001 1374 ntBASIC27.29■■□□□ 1.96
DDX11Q96FC9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.29■■□□□ 1.96
DDX11Q96FC9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX11Q96FC9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
DDX11Q96FC9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
DDX11Q96FC9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DDX11Q96FC9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX11Q96FC9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX11Q96FC9 AC019069.1-201ENST00000610008 1333 ntBASIC27.28■■□□□ 1.96
DDX11Q96FC9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX11Q96FC9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.28■■□□□ 1.96
DDX11Q96FC9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
DDX11Q96FC9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.27■■□□□ 1.96
DDX11Q96FC9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
DDX11Q96FC9 AC021242.3-201ENST00000607598 1377 ntBASIC27.27■■□□□ 1.96
DDX11Q96FC9 TSPY9P-201ENST00000440215 945 ntBASIC27.27■■□□□ 1.96
DDX11Q96FC9 TSPY11P-201ENST00000442607 1045 ntBASIC27.27■■□□□ 1.96
DDX11Q96FC9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.27■■□□□ 1.96
DDX11Q96FC9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.27■■□□□ 1.96
DDX11Q96FC9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX11Q96FC9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
DDX11Q96FC9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX11Q96FC9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX11Q96FC9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
DDX11Q96FC9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX11Q96FC9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.26■■□□□ 1.95
DDX11Q96FC9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.26■■□□□ 1.95
DDX11Q96FC9 HLA-L-211ENST00000482052 1765 ntBASIC27.26■■□□□ 1.95
DDX11Q96FC9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
DDX11Q96FC9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX11Q96FC9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX11Q96FC9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX11Q96FC9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX11Q96FC9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms