Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL53Q96EL3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPL53Q96EL3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.34■□□□□ 0.37
MRPL53Q96EL3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL53Q96EL3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.34■□□□□ 0.37
MRPL53Q96EL3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL53Q96EL3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
MRPL53Q96EL3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MRPL53Q96EL3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
MRPL53Q96EL3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
MRPL53Q96EL3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.33■□□□□ 0.37
MRPL53Q96EL3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
MRPL53Q96EL3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MRPL53Q96EL3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL53Q96EL3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 AL592293.1-201ENST00000502889 1188 ntBASIC17.32■□□□□ 0.36
MRPL53Q96EL3 MIR6765-201ENST00000614092 87 ntBASIC17.32■□□□□ 0.36
MRPL53Q96EL3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPL53Q96EL3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.31■□□□□ 0.36
MRPL53Q96EL3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPL53Q96EL3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.3■□□□□ 0.36
MRPL53Q96EL3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPL53Q96EL3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.29■□□□□ 0.36
MRPL53Q96EL3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 SPCS2P3-201ENST00000500401 656 ntBASIC17.28■□□□□ 0.36
MRPL53Q96EL3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.28■□□□□ 0.36
MRPL53Q96EL3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPL53Q96EL3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.27■□□□□ 0.36
MRPL53Q96EL3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.27■□□□□ 0.36
MRPL53Q96EL3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.27■□□□□ 0.36
MRPL53Q96EL3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPL53Q96EL3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.27■□□□□ 0.36
MRPL53Q96EL3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPL53Q96EL3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPL53Q96EL3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
MRPL53Q96EL3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MRPL53Q96EL3 AC133561.1-201ENST00000568600 2415 ntBASIC17.27■□□□□ 0.35
MRPL53Q96EL3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.27■□□□□ 0.35
MRPL53Q96EL3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPL53Q96EL3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPL53Q96EL3 AL022069.1-201ENST00000568025 1636 ntBASIC17.26■□□□□ 0.35
MRPL53Q96EL3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MRPL53Q96EL3 AC011551.1-201ENST00000614101 683 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms