Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CTHRC1Q96CG8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTHRC1Q96CG8 AC131274.2-201ENST00000580697 1507 ntBASIC21.54■■□□□ 1.04
CTHRC1Q96CG8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.54■■□□□ 1.04
CTHRC1Q96CG8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 AC004812.2-201ENST00000611079 2094 ntBASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTHRC1Q96CG8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTHRC1Q96CG8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTHRC1Q96CG8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTHRC1Q96CG8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.52■■□□□ 1.04
CTHRC1Q96CG8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTHRC1Q96CG8 AL022069.1-201ENST00000568025 1636 ntBASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.51■■□□□ 1.03
CTHRC1Q96CG8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTHRC1Q96CG8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTHRC1Q96CG8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 AL451085.2-201ENST00000605085 799 ntBASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 AC021242.3-201ENST00000607598 1377 ntBASIC21.48■■□□□ 1.03
CTHRC1Q96CG8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.47■■□□□ 1.03
CTHRC1Q96CG8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CTHRC1Q96CG8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTHRC1Q96CG8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.47■■□□□ 1.03
CTHRC1Q96CG8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CTHRC1Q96CG8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTHRC1Q96CG8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTHRC1Q96CG8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTHRC1Q96CG8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.46■■□□□ 1.03
CTHRC1Q96CG8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.46■■□□□ 1.03
CTHRC1Q96CG8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.46■■□□□ 1.03
CTHRC1Q96CG8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTHRC1Q96CG8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CTHRC1Q96CG8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 AC009299.2-201ENST00000482477 511 ntBASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 Z92544.1-202ENST00000571933 1220 ntBASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTHRC1Q96CG8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 BX664725.1-201ENST00000438252 379 ntBASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 AC004448.1-201ENST00000458332 883 ntBASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTHRC1Q96CG8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms