Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.51■■□□□ 1.51
RFFLQ8WZ73 AC012676.1-201ENST00000574705 1949 ntBASIC24.51■■□□□ 1.51
RFFLQ8WZ73 AC068473.5-201ENST00000616428 2072 ntBASIC24.5■■□□□ 1.51
RFFLQ8WZ73 AC090877.2-201ENST00000558441 1738 ntBASIC24.5■■□□□ 1.51
RFFLQ8WZ73 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RFFLQ8WZ73 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RFFLQ8WZ73 AC087393.1-201ENST00000582896 145 ntBASIC24.5■■□□□ 1.51
RFFLQ8WZ73 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RFFLQ8WZ73 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RFFLQ8WZ73 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RFFLQ8WZ73 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.49■■□□□ 1.51
RFFLQ8WZ73 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RFFLQ8WZ73 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 MIR6765-201ENST00000614092 87 ntBASIC24.47■■□□□ 1.51
RFFLQ8WZ73 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RFFLQ8WZ73 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFFLQ8WZ73 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.45■■□□□ 1.51
RFFLQ8WZ73 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
RFFLQ8WZ73 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RFFLQ8WZ73 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.45■■□□□ 1.5
RFFLQ8WZ73 AL592295.1-201ENST00000400984 884 ntBASIC24.45■■□□□ 1.5
RFFLQ8WZ73 DUX4L9-201ENST00000449051 1259 ntBASIC24.45■■□□□ 1.5
RFFLQ8WZ73 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
RFFLQ8WZ73 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RFFLQ8WZ73 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RFFLQ8WZ73 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RFFLQ8WZ73 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.45■■□□□ 1.5
RFFLQ8WZ73 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.44■■□□□ 1.5
RFFLQ8WZ73 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.44■■□□□ 1.5
RFFLQ8WZ73 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFFLQ8WZ73 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFFLQ8WZ73 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.43■■□□□ 1.5
RFFLQ8WZ73 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.43■■□□□ 1.5
RFFLQ8WZ73 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFFLQ8WZ73 RARRES2P1-201ENST00000474487 481 ntBASIC24.43■■□□□ 1.5
RFFLQ8WZ73 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFFLQ8WZ73 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFFLQ8WZ73 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFFLQ8WZ73 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFFLQ8WZ73 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.41■■□□□ 1.5
RFFLQ8WZ73 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFFLQ8WZ73 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.41■■□□□ 1.5
RFFLQ8WZ73 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RFFLQ8WZ73 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.41■■□□□ 1.5
RFFLQ8WZ73 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RFFLQ8WZ73 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RFFLQ8WZ73 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms