Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH19Q8TAB3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH19Q8TAB3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PCDH19Q8TAB3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.9■■□□□ 1.42
PCDH19Q8TAB3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH19Q8TAB3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDH19Q8TAB3 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDH19Q8TAB3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH19Q8TAB3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PCDH19Q8TAB3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH19Q8TAB3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.89■■□□□ 1.42
PCDH19Q8TAB3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH19Q8TAB3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PCDH19Q8TAB3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDH19Q8TAB3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 AC103834.1-201ENST00000520383 144 ntBASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDH19Q8TAB3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH19Q8TAB3 KRT8P33-201ENST00000508125 1423 ntBASIC23.87■■□□□ 1.41
PCDH19Q8TAB3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH19Q8TAB3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH19Q8TAB3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDH19Q8TAB3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH19Q8TAB3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH19Q8TAB3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 KRT18P24-201ENST00000344739 1156 ntBASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 MIR4508-201ENST00000584178 70 ntBASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH19Q8TAB3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH19Q8TAB3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH19Q8TAB3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH19Q8TAB3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.84■■□□□ 1.41
PCDH19Q8TAB3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDH19Q8TAB3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.83■■□□□ 1.41
PCDH19Q8TAB3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
PCDH19Q8TAB3 AL451085.2-201ENST00000605085 799 ntBASIC23.83■■□□□ 1.41
PCDH19Q8TAB3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH19Q8TAB3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH19Q8TAB3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.83■■□□□ 1.4
PCDH19Q8TAB3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.83■■□□□ 1.4
PCDH19Q8TAB3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
PCDH19Q8TAB3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDH19Q8TAB3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDH19Q8TAB3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH19Q8TAB3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDH19Q8TAB3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 MIR4281-201ENST00000580852 62 ntBASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 THA1P-201ENST00000590384 1145 ntBASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDH19Q8TAB3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 AL035685.1-201ENST00000636663 812 ntBASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDH19Q8TAB3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms