Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMRP1Q8NCR6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.22■■□□□ 1.47
SMRP1Q8NCR6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMRP1Q8NCR6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 IKBKGP1-201ENST00000612193 1073 ntBASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.21■■□□□ 1.47
SMRP1Q8NCR6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 AC034268.1-201ENST00000441047 882 ntBASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 AC022517.1-201ENST00000592429 346 ntBASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SMRP1Q8NCR6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMRP1Q8NCR6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 AC136469.2-201ENST00000623944 1028 ntBASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SMRP1Q8NCR6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMRP1Q8NCR6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.17■■□□□ 1.46
SMRP1Q8NCR6 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.17■■□□□ 1.46
SMRP1Q8NCR6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SMRP1Q8NCR6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SMRP1Q8NCR6 AC097639.1-201ENST00000565519 1891 ntBASIC24.17■■□□□ 1.46
SMRP1Q8NCR6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMRP1Q8NCR6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 AL137784.2-201ENST00000607332 1000 ntBASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMRP1Q8NCR6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SMRP1Q8NCR6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMRP1Q8NCR6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.14■■□□□ 1.45
SMRP1Q8NCR6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.14■■□□□ 1.45
SMRP1Q8NCR6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMRP1Q8NCR6 AC233992.3-201ENST00000607491 485 ntBASIC24.14■■□□□ 1.45
SMRP1Q8NCR6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMRP1Q8NCR6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
SMRP1Q8NCR6 AC009102.2-201ENST00000606772 1639 ntBASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMRP1Q8NCR6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 KRT18P5-201ENST00000436075 1291 ntBASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 AC092437.1-201ENST00000624794 1048 ntBASIC24.12■■□□□ 1.45
SMRP1Q8NCR6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms