Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.09■□□□□ 0.97
LINC00471Q8N535 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.09■□□□□ 0.97
LINC00471Q8N535 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00471Q8N535 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00471Q8N535 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00471Q8N535 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00471Q8N535 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.08■□□□□ 0.97
LINC00471Q8N535 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00471Q8N535 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LINC00471Q8N535 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LINC00471Q8N535 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00471Q8N535 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00471Q8N535 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00471Q8N535 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LINC00471Q8N535 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.07■□□□□ 0.96
LINC00471Q8N535 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.07■□□□□ 0.96
LINC00471Q8N535 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.07■□□□□ 0.96
LINC00471Q8N535 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00471Q8N535 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.06■□□□□ 0.96
LINC00471Q8N535 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00471Q8N535 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00471Q8N535 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.06■□□□□ 0.96
LINC00471Q8N535 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.06■□□□□ 0.96
LINC00471Q8N535 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00471Q8N535 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00471Q8N535 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00471Q8N535 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00471Q8N535 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00471Q8N535 AC090877.2-201ENST00000558441 1738 ntBASIC21.05■□□□□ 0.96
LINC00471Q8N535 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LINC00471Q8N535 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.05■□□□□ 0.96
LINC00471Q8N535 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LINC00471Q8N535 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00471Q8N535 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00471Q8N535 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00471Q8N535 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00471Q8N535 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00471Q8N535 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00471Q8N535 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.04■□□□□ 0.96
LINC00471Q8N535 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00471Q8N535 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00471Q8N535 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00471Q8N535 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
LINC00471Q8N535 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
LINC00471Q8N535 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.03■□□□□ 0.96
LINC00471Q8N535 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00471Q8N535 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.03■□□□□ 0.96
LINC00471Q8N535 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00471Q8N535 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00471Q8N535 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LINC00471Q8N535 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.03■□□□□ 0.96
LINC00471Q8N535 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.03■□□□□ 0.96
LINC00471Q8N535 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.02■□□□□ 0.96
LINC00471Q8N535 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00471Q8N535 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00471Q8N535 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
LINC00471Q8N535 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.02■□□□□ 0.96
LINC00471Q8N535 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00471Q8N535 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LINC00471Q8N535 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.02■□□□□ 0.96
LINC00471Q8N535 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
LINC00471Q8N535 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.01■□□□□ 0.95
LINC00471Q8N535 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00471Q8N535 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00471Q8N535 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00471Q8N535 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00471Q8N535 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21■□□□□ 0.95
LINC00471Q8N535 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC00471Q8N535 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00471Q8N535 GPX1-201ENST00000419349 1106 ntBASIC21■□□□□ 0.95
LINC00471Q8N535 RPS2P7-201ENST00000447334 885 ntBASIC21■□□□□ 0.95
LINC00471Q8N535 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LINC00471Q8N535 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00471Q8N535 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
LINC00471Q8N535 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC00471Q8N535 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LINC00471Q8N535 AC092068.2-201ENST00000590491 1708 ntBASIC20.99■□□□□ 0.95
LINC00471Q8N535 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms