Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYNPOQ8N3V7 AC005703.6-201ENST00000623265 1329 ntBASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 AL136967.2-201ENST00000623968 743 ntBASIC23.6■■□□□ 1.37
SYNPOQ8N3V7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 AC104564.3-201ENST00000582367 638 ntBASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYNPOQ8N3V7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
SYNPOQ8N3V7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.58■■□□□ 1.37
SYNPOQ8N3V7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SYNPOQ8N3V7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 AC105265.2-201ENST00000467189 838 ntBASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYNPOQ8N3V7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SYNPOQ8N3V7 MIR939-201ENST00000401314 82 ntBASIC23.56■■□□□ 1.36
SYNPOQ8N3V7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.56■■□□□ 1.36
SYNPOQ8N3V7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SYNPOQ8N3V7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYNPOQ8N3V7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.55■■□□□ 1.36
SYNPOQ8N3V7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.55■■□□□ 1.36
SYNPOQ8N3V7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SYNPOQ8N3V7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYNPOQ8N3V7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYNPOQ8N3V7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SYNPOQ8N3V7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 AF213884.3-201ENST00000563833 479 ntBASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SYNPOQ8N3V7 SYT6-210ENST00000641643 1587 ntBASIC23.53■■□□□ 1.36
SYNPOQ8N3V7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYNPOQ8N3V7 AC091305.1-201ENST00000479476 895 ntBASIC23.53■■□□□ 1.36
SYNPOQ8N3V7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.53■■□□□ 1.36
SYNPOQ8N3V7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.53■■□□□ 1.36
SYNPOQ8N3V7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SYNPOQ8N3V7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.53■■□□□ 1.36
SYNPOQ8N3V7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SYNPOQ8N3V7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SYNPOQ8N3V7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.52■■□□□ 1.36
SYNPOQ8N3V7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SYNPOQ8N3V7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SYNPOQ8N3V7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SYNPOQ8N3V7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
SYNPOQ8N3V7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 AP001330.3-201ENST00000520123 633 ntBASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SYNPOQ8N3V7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 AC096887.2-201ENST00000623443 1957 ntBASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms