Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 PVT1_1.1-201ENST00000615125 194 ntBASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 AC004812.2-201ENST00000611079 2094 ntBASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF440Q8IYI8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AC120024.1-201ENST00000562672 995 ntBASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AL033527.3-201ENST00000566366 1196 ntBASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 THA1P-201ENST00000590384 1145 ntBASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AL022069.1-201ENST00000568025 1636 ntBASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ZNF440Q8IYI8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 MIR4508-201ENST00000584178 70 ntBASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF440Q8IYI8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF440Q8IYI8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF440Q8IYI8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.09■□□□□ 0.97
ZNF440Q8IYI8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF440Q8IYI8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF440Q8IYI8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF440Q8IYI8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF440Q8IYI8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF440Q8IYI8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF440Q8IYI8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF440Q8IYI8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF440Q8IYI8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF440Q8IYI8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF440Q8IYI8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF440Q8IYI8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF440Q8IYI8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF440Q8IYI8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF440Q8IYI8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF440Q8IYI8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF440Q8IYI8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF440Q8IYI8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 YBX1P4-201ENST00000392794 808 ntBASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 MIR4281-201ENST00000580852 62 ntBASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF440Q8IYI8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF440Q8IYI8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF440Q8IYI8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF440Q8IYI8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ZNF440Q8IYI8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms