Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC011298.3-201ENST00000615796 283 ntBASIC28.66■■■□□ 2.18
SLX4Q8IY92 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
SLX4Q8IY92 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SLX4Q8IY92 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SLX4Q8IY92 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
SLX4Q8IY92 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
SLX4Q8IY92 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.65■■■□□ 2.18
SLX4Q8IY92 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SLX4Q8IY92 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SLX4Q8IY92 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SLX4Q8IY92 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
SLX4Q8IY92 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SLX4Q8IY92 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SLX4Q8IY92 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SLX4Q8IY92 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SLX4Q8IY92 AC131274.2-201ENST00000580697 1507 ntBASIC28.64■■■□□ 2.18
SLX4Q8IY92 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
SLX4Q8IY92 AC099791.1-201ENST00000416440 715 ntBASIC28.64■■■□□ 2.17
SLX4Q8IY92 AC099791.2-201ENST00000605725 427 ntBASIC28.64■■■□□ 2.17
SLX4Q8IY92 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.64■■■□□ 2.17
SLX4Q8IY92 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SLX4Q8IY92 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SLX4Q8IY92 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.63■■■□□ 2.17
SLX4Q8IY92 AC090192.1-201ENST00000517740 490 ntBASIC28.63■■■□□ 2.17
SLX4Q8IY92 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SLX4Q8IY92 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SLX4Q8IY92 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
SLX4Q8IY92 IKBKGP1-201ENST00000612193 1073 ntBASIC28.62■■■□□ 2.17
SLX4Q8IY92 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SLX4Q8IY92 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SLX4Q8IY92 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.62■■■□□ 2.17
SLX4Q8IY92 AC008764.7-201ENST00000593779 1081 ntBASIC28.62■■■□□ 2.17
SLX4Q8IY92 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SLX4Q8IY92 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
SLX4Q8IY92 AC142086.6-201ENST00000621154 1765 ntBASIC28.61■■■□□ 2.17
SLX4Q8IY92 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
SLX4Q8IY92 IRS3P-201ENST00000223076 1006 ntBASIC28.61■■■□□ 2.17
SLX4Q8IY92 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.61■■■□□ 2.17
SLX4Q8IY92 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
SLX4Q8IY92 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.61■■■□□ 2.17
SLX4Q8IY92 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.61■■■□□ 2.17
SLX4Q8IY92 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.61■■■□□ 2.17
SLX4Q8IY92 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SLX4Q8IY92 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
SLX4Q8IY92 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.6■■■□□ 2.17
SLX4Q8IY92 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SLX4Q8IY92 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SLX4Q8IY92 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
SLX4Q8IY92 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SLX4Q8IY92 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SLX4Q8IY92 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
SLX4Q8IY92 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SLX4Q8IY92 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.6■■■□□ 2.17
SLX4Q8IY92 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.59■■■□□ 2.17
SLX4Q8IY92 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.59■■■□□ 2.17
SLX4Q8IY92 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SLX4Q8IY92 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SLX4Q8IY92 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SLX4Q8IY92 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SLX4Q8IY92 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SLX4Q8IY92 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.59■■■□□ 2.17
SLX4Q8IY92 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SLX4Q8IY92 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SLX4Q8IY92 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SLX4Q8IY92 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.58■■■□□ 2.17
SLX4Q8IY92 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SLX4Q8IY92 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SLX4Q8IY92 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SLX4Q8IY92 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.57■■■□□ 2.16
SLX4Q8IY92 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SLX4Q8IY92 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.57■■■□□ 2.16
SLX4Q8IY92 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SLX4Q8IY92 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SLX4Q8IY92 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.55■■■□□ 2.16
SLX4Q8IY92 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
SLX4Q8IY92 AC034268.1-201ENST00000441047 882 ntBASIC28.54■■■□□ 2.16
SLX4Q8IY92 AL138724.1-201ENST00000606771 1088 ntBASIC28.54■■■□□ 2.16
SLX4Q8IY92 AC092171.4-201ENST00000609130 632 ntBASIC28.54■■■□□ 2.16
SLX4Q8IY92 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.54■■■□□ 2.16
SLX4Q8IY92 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.54■■■□□ 2.16
SLX4Q8IY92 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SLX4Q8IY92 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SLX4Q8IY92 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SLX4Q8IY92 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
SLX4Q8IY92 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SLX4Q8IY92 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.53■■■□□ 2.16
SLX4Q8IY92 RARRES2P11-201ENST00000635158 484 ntBASIC28.53■■■□□ 2.16
SLX4Q8IY92 C17orf82-201ENST00000623772 1530 ntBASIC28.53■■■□□ 2.16
SLX4Q8IY92 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SLX4Q8IY92 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.52■■■□□ 2.16
SLX4Q8IY92 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
SLX4Q8IY92 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms