Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 AC129492.7-201ENST00000622992 756 ntBASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SCUBE1Q8IWY4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SCUBE1Q8IWY4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SCUBE1Q8IWY4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SCUBE1Q8IWY4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 SPCS2P3-201ENST00000500401 656 ntBASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 ABCB10P4-201ENST00000566803 2184 ntBASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 AL117328.2-201ENST00000624617 1940 ntBASIC22.69■■□□□ 1.22
SCUBE1Q8IWY4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.68■■□□□ 1.22
SCUBE1Q8IWY4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SCUBE1Q8IWY4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SCUBE1Q8IWY4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SCUBE1Q8IWY4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCUBE1Q8IWY4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCUBE1Q8IWY4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCUBE1Q8IWY4 DUX4L9-201ENST00000449051 1259 ntBASIC22.66■■□□□ 1.22
SCUBE1Q8IWY4 AC012354.3-201ENST00000623734 483 ntBASIC22.66■■□□□ 1.22
SCUBE1Q8IWY4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCUBE1Q8IWY4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
SCUBE1Q8IWY4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SCUBE1Q8IWY4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SCUBE1Q8IWY4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCUBE1Q8IWY4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SCUBE1Q8IWY4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SCUBE1Q8IWY4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SCUBE1Q8IWY4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.63■■□□□ 1.21
SCUBE1Q8IWY4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCUBE1Q8IWY4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SCUBE1Q8IWY4 AC004987.1-201ENST00000428627 508 ntBASIC22.63■■□□□ 1.21
SCUBE1Q8IWY4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCUBE1Q8IWY4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCUBE1Q8IWY4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCUBE1Q8IWY4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 ATP5G2P3-201ENST00000429083 425 ntBASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SCUBE1Q8IWY4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.61■■□□□ 1.21
SCUBE1Q8IWY4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCUBE1Q8IWY4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
SCUBE1Q8IWY4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCUBE1Q8IWY4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SCUBE1Q8IWY4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SCUBE1Q8IWY4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 TSPY13P-201ENST00000338964 914 ntBASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 AC018755.3-202ENST00000596210 929 ntBASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SCUBE1Q8IWY4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms