Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.53■■■□□ 2.64
NME9Q86XW9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
NME9Q86XW9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NME9Q86XW9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.53■■■□□ 2.64
NME9Q86XW9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NME9Q86XW9 PBX2P1-201ENST00000493219 1291 ntBASIC31.53■■■□□ 2.64
NME9Q86XW9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.53■■■□□ 2.64
NME9Q86XW9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
NME9Q86XW9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
NME9Q86XW9 UNC93B3-201ENST00000308076 687 ntBASIC31.52■■■□□ 2.64
NME9Q86XW9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.52■■■□□ 2.64
NME9Q86XW9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NME9Q86XW9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NME9Q86XW9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NME9Q86XW9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NME9Q86XW9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
NME9Q86XW9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
NME9Q86XW9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.64
NME9Q86XW9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.51■■■□□ 2.64
NME9Q86XW9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
NME9Q86XW9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
NME9Q86XW9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
NME9Q86XW9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
NME9Q86XW9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.5■■■□□ 2.63
NME9Q86XW9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
NME9Q86XW9 AL031432.3-201ENST00000607698 485 ntBASIC31.5■■■□□ 2.63
NME9Q86XW9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
NME9Q86XW9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.5■■■□□ 2.63
NME9Q86XW9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
NME9Q86XW9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.5■■■□□ 2.63
NME9Q86XW9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.5■■■□□ 2.63
NME9Q86XW9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NME9Q86XW9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NME9Q86XW9 MIR6089-201ENST00000616698 64 ntBASIC31.49■■■□□ 2.63
NME9Q86XW9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
NME9Q86XW9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.49■■■□□ 2.63
NME9Q86XW9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NME9Q86XW9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NME9Q86XW9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NME9Q86XW9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.48■■■□□ 2.63
NME9Q86XW9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NME9Q86XW9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.47■■■□□ 2.63
NME9Q86XW9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.47■■■□□ 2.63
NME9Q86XW9 SRD5A1P1-201ENST00000442297 786 ntBASIC31.47■■■□□ 2.63
NME9Q86XW9 AL136162.1-201ENST00000607711 1078 ntBASIC31.47■■■□□ 2.63
NME9Q86XW9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
NME9Q86XW9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
NME9Q86XW9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NME9Q86XW9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.46■■■□□ 2.63
NME9Q86XW9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.46■■■□□ 2.63
NME9Q86XW9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NME9Q86XW9 AC005703.6-201ENST00000623265 1329 ntBASIC31.46■■■□□ 2.63
NME9Q86XW9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
NME9Q86XW9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.45■■■□□ 2.63
NME9Q86XW9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
NME9Q86XW9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
NME9Q86XW9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
NME9Q86XW9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.43■■■□□ 2.62
NME9Q86XW9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.43■■■□□ 2.62
NME9Q86XW9 AC145676.1-201ENST00000514988 2004 ntBASIC31.43■■■□□ 2.62
NME9Q86XW9 ZNRF2P3-201ENST00000424200 374 ntBASIC31.43■■■□□ 2.62
NME9Q86XW9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NME9Q86XW9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.43■■■□□ 2.62
NME9Q86XW9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.43■■■□□ 2.62
NME9Q86XW9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.43■■■□□ 2.62
NME9Q86XW9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.43■■■□□ 2.62
NME9Q86XW9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NME9Q86XW9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
NME9Q86XW9 AC024257.2-201ENST00000549699 147 ntBASIC31.42■■■□□ 2.62
NME9Q86XW9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.42■■■□□ 2.62
NME9Q86XW9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
NME9Q86XW9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
NME9Q86XW9 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.42■■■□□ 2.62
NME9Q86XW9 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.42■■■□□ 2.62
NME9Q86XW9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NME9Q86XW9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
NME9Q86XW9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.41■■■□□ 2.62
NME9Q86XW9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.41■■■□□ 2.62
NME9Q86XW9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.41■■■□□ 2.62
NME9Q86XW9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
NME9Q86XW9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NME9Q86XW9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.4■■■□□ 2.62
NME9Q86XW9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.4■■■□□ 2.62
NME9Q86XW9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NME9Q86XW9 SUDS3P1-201ENST00000505831 966 ntBASIC31.4■■■□□ 2.62
NME9Q86XW9 AC135279.3-201ENST00000610945 1311 ntBASIC31.4■■■□□ 2.62
NME9Q86XW9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
NME9Q86XW9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NME9Q86XW9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NME9Q86XW9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.39■■■□□ 2.62
NME9Q86XW9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.39■■■□□ 2.62
NME9Q86XW9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NME9Q86XW9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.39■■■□□ 2.62
NME9Q86XW9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.39■■■□□ 2.62
NME9Q86XW9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NME9Q86XW9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
NME9Q86XW9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NME9Q86XW9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
NME9Q86XW9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NME9Q86XW9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms