Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.07■■□□□ 1.28
LDB1Q86U70 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LDB1Q86U70 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
LDB1Q86U70 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.06■■□□□ 1.28
LDB1Q86U70 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDB1Q86U70 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.06■■□□□ 1.28
LDB1Q86U70 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDB1Q86U70 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
LDB1Q86U70 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDB1Q86U70 AC120024.1-201ENST00000562672 995 ntBASIC23.05■■□□□ 1.28
LDB1Q86U70 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.05■■□□□ 1.28
LDB1Q86U70 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDB1Q86U70 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDB1Q86U70 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LDB1Q86U70 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDB1Q86U70 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
LDB1Q86U70 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LDB1Q86U70 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LDB1Q86U70 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LDB1Q86U70 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
LDB1Q86U70 AC022616.5-201ENST00000518796 181 ntBASIC23.04■■□□□ 1.28
LDB1Q86U70 AC103834.1-201ENST00000520383 144 ntBASIC23.04■■□□□ 1.28
LDB1Q86U70 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LDB1Q86U70 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.04■■□□□ 1.28
LDB1Q86U70 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
LDB1Q86U70 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LDB1Q86U70 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
LDB1Q86U70 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LDB1Q86U70 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDB1Q86U70 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDB1Q86U70 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.03■■□□□ 1.28
LDB1Q86U70 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LDB1Q86U70 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDB1Q86U70 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.03■■□□□ 1.28
LDB1Q86U70 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.03■■□□□ 1.28
LDB1Q86U70 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDB1Q86U70 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LDB1Q86U70 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.02■■□□□ 1.28
LDB1Q86U70 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LDB1Q86U70 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDB1Q86U70 AC011551.1-201ENST00000614101 683 ntBASIC23.02■■□□□ 1.28
LDB1Q86U70 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.02■■□□□ 1.28
LDB1Q86U70 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.02■■□□□ 1.28
LDB1Q86U70 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.01■■□□□ 1.27
LDB1Q86U70 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.01■■□□□ 1.27
LDB1Q86U70 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.01■■□□□ 1.27
LDB1Q86U70 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
LDB1Q86U70 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
LDB1Q86U70 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.01■■□□□ 1.27
LDB1Q86U70 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LDB1Q86U70 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
LDB1Q86U70 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LDB1Q86U70 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LDB1Q86U70 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23■■□□□ 1.27
LDB1Q86U70 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LDB1Q86U70 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LDB1Q86U70 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LDB1Q86U70 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.99■■□□□ 1.27
LDB1Q86U70 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.99■■□□□ 1.27
LDB1Q86U70 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LDB1Q86U70 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
LDB1Q86U70 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LDB1Q86U70 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.98■■□□□ 1.27
LDB1Q86U70 MIR4508-201ENST00000584178 70 ntBASIC22.98■■□□□ 1.27
LDB1Q86U70 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
LDB1Q86U70 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LDB1Q86U70 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LDB1Q86U70 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LDB1Q86U70 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.97■■□□□ 1.27
LDB1Q86U70 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LDB1Q86U70 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
LDB1Q86U70 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LDB1Q86U70 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.97■■□□□ 1.27
LDB1Q86U70 THA1P-201ENST00000590384 1145 ntBASIC22.97■■□□□ 1.27
LDB1Q86U70 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LDB1Q86U70 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LDB1Q86U70 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LDB1Q86U70 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LDB1Q86U70 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
LDB1Q86U70 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.96■■□□□ 1.27
LDB1Q86U70 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LDB1Q86U70 KRT18P24-201ENST00000344739 1156 ntBASIC22.96■■□□□ 1.27
LDB1Q86U70 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LDB1Q86U70 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.95■■□□□ 1.26
LDB1Q86U70 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LDB1Q86U70 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LDB1Q86U70 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LDB1Q86U70 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.95■■□□□ 1.26
LDB1Q86U70 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
LDB1Q86U70 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LDB1Q86U70 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LDB1Q86U70 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
LDB1Q86U70 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms