Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF180Q86T96 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RNF180Q86T96 SERBP1P1-201ENST00000396021 1160 ntBASIC25.89■■□□□ 1.74
RNF180Q86T96 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF180Q86T96 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.89■■□□□ 1.74
RNF180Q86T96 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.89■■□□□ 1.74
RNF180Q86T96 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RNF180Q86T96 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RNF180Q86T96 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
RNF180Q86T96 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RNF180Q86T96 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.89■■□□□ 1.73
RNF180Q86T96 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF180Q86T96 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF180Q86T96 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF180Q86T96 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
RNF180Q86T96 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF180Q86T96 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF180Q86T96 AC027682.1-201ENST00000562846 899 ntBASIC25.88■■□□□ 1.73
RNF180Q86T96 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF180Q86T96 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.88■■□□□ 1.73
RNF180Q86T96 ERN1-208ENST00000606895 2068 ntBASIC25.87■■□□□ 1.73
RNF180Q86T96 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.87■■□□□ 1.73
RNF180Q86T96 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RNF180Q86T96 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.87■■□□□ 1.73
RNF180Q86T96 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF180Q86T96 AC087623.3-201ENST00000607047 1098 ntBASIC25.87■■□□□ 1.73
RNF180Q86T96 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF180Q86T96 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF180Q86T96 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.86■■□□□ 1.73
RNF180Q86T96 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.86■■□□□ 1.73
RNF180Q86T96 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RNF180Q86T96 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF180Q86T96 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF180Q86T96 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF180Q86T96 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.85■■□□□ 1.73
RNF180Q86T96 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.85■■□□□ 1.73
RNF180Q86T96 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF180Q86T96 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF180Q86T96 AL162430.1-201ENST00000480705 870 ntBASIC25.85■■□□□ 1.73
RNF180Q86T96 AC099791.2-201ENST00000605725 427 ntBASIC25.85■■□□□ 1.73
RNF180Q86T96 AL138724.1-201ENST00000606771 1088 ntBASIC25.85■■□□□ 1.73
RNF180Q86T96 AC011298.3-201ENST00000615796 283 ntBASIC25.85■■□□□ 1.73
RNF180Q86T96 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.85■■□□□ 1.73
RNF180Q86T96 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF180Q86T96 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF180Q86T96 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF180Q86T96 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.84■■□□□ 1.73
RNF180Q86T96 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF180Q86T96 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF180Q86T96 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF180Q86T96 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.84■■□□□ 1.73
RNF180Q86T96 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF180Q86T96 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF180Q86T96 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
RNF180Q86T96 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RNF180Q86T96 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
RNF180Q86T96 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF180Q86T96 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.83■■□□□ 1.73
RNF180Q86T96 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF180Q86T96 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RNF180Q86T96 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.83■■□□□ 1.73
RNF180Q86T96 IRS3P-201ENST00000223076 1006 ntBASIC25.82■■□□□ 1.72
RNF180Q86T96 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF180Q86T96 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.82■■□□□ 1.72
RNF180Q86T96 AC008764.7-201ENST00000593779 1081 ntBASIC25.82■■□□□ 1.72
RNF180Q86T96 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.82■■□□□ 1.72
RNF180Q86T96 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.82■■□□□ 1.72
RNF180Q86T96 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RNF180Q86T96 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
RNF180Q86T96 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
RNF180Q86T96 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF180Q86T96 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RNF180Q86T96 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF180Q86T96 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RNF180Q86T96 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RNF180Q86T96 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF180Q86T96 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RNF180Q86T96 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
RNF180Q86T96 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.81■■□□□ 1.72
RNF180Q86T96 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF180Q86T96 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.81■■□□□ 1.72
RNF180Q86T96 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.81■■□□□ 1.72
RNF180Q86T96 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RNF180Q86T96 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF180Q86T96 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF180Q86T96 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.8■■□□□ 1.72
RNF180Q86T96 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.79■■□□□ 1.72
RNF180Q86T96 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RNF180Q86T96 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
RNF180Q86T96 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.79■■□□□ 1.72
RNF180Q86T96 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
RNF180Q86T96 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RNF180Q86T96 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RNF180Q86T96 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.78■■□□□ 1.72
RNF180Q86T96 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RNF180Q86T96 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.78■■□□□ 1.72
RNF180Q86T96 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.78■■□□□ 1.72
RNF180Q86T96 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.78■■□□□ 1.72
RNF180Q86T96 AC010501.1-201ENST00000606270 1962 ntBASIC25.78■■□□□ 1.72
RNF180Q86T96 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms