Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MRPL54Q6P161 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.4■□□□□ 0.38
MRPL54Q6P161 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MRPL54Q6P161 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL54Q6P161 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.39■□□□□ 0.38
MRPL54Q6P161 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.39■□□□□ 0.38
MRPL54Q6P161 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.39■□□□□ 0.38
MRPL54Q6P161 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MRPL54Q6P161 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.39■□□□□ 0.38
MRPL54Q6P161 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL54Q6P161 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL54Q6P161 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MRPL54Q6P161 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.39■□□□□ 0.37
MRPL54Q6P161 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
MRPL54Q6P161 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL54Q6P161 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL54Q6P161 C1orf229-201ENST00000623686 2258 ntBASIC17.38■□□□□ 0.37
MRPL54Q6P161 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.38■□□□□ 0.37
MRPL54Q6P161 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MRPL54Q6P161 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.38■□□□□ 0.37
MRPL54Q6P161 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL54Q6P161 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL54Q6P161 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 LINC00526-201ENST00000581067 1875 ntBASIC17.37■□□□□ 0.37
MRPL54Q6P161 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL54Q6P161 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 AC007375.3-201ENST00000600936 2314 ntBASIC17.37■□□□□ 0.37
MRPL54Q6P161 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL54Q6P161 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL54Q6P161 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL54Q6P161 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL54Q6P161 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL54Q6P161 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MRPL54Q6P161 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.36■□□□□ 0.37
MRPL54Q6P161 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.36■□□□□ 0.37
MRPL54Q6P161 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPL54Q6P161 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.36■□□□□ 0.37
MRPL54Q6P161 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPL54Q6P161 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPL54Q6P161 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL54Q6P161 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MRPL54Q6P161 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL54Q6P161 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL54Q6P161 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL54Q6P161 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL54Q6P161 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL54Q6P161 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MRPL54Q6P161 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
MRPL54Q6P161 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL54Q6P161 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL54Q6P161 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPL54Q6P161 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
MRPL54Q6P161 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL54Q6P161 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL54Q6P161 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL54Q6P161 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPL54Q6P161 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL54Q6P161 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPL54Q6P161 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
MRPL54Q6P161 AC137767.1-201ENST00000602918 1920 ntBASIC17.34■□□□□ 0.37
MRPL54Q6P161 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL54Q6P161 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPL54Q6P161 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL54Q6P161 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL54Q6P161 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MRPL54Q6P161 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MRPL54Q6P161 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MRPL54Q6P161 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.33■□□□□ 0.36
MRPL54Q6P161 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.33■□□□□ 0.36
MRPL54Q6P161 AC136428.2-201ENST00000563187 214 ntBASIC17.33■□□□□ 0.36
MRPL54Q6P161 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms