Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRAMEF9Q5VWM5 AC011551.1-201ENST00000614101 683 ntBASIC22.33■■□□□ 1.17
PRAMEF9Q5VWM5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
PRAMEF9Q5VWM5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF9Q5VWM5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRAMEF9Q5VWM5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.32■■□□□ 1.16
PRAMEF9Q5VWM5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 MIR4508-201ENST00000584178 70 ntBASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRAMEF9Q5VWM5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.3■■□□□ 1.16
PRAMEF9Q5VWM5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.3■■□□□ 1.16
PRAMEF9Q5VWM5 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.3■■□□□ 1.16
PRAMEF9Q5VWM5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRAMEF9Q5VWM5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PRAMEF9Q5VWM5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PRAMEF9Q5VWM5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRAMEF9Q5VWM5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PRAMEF9Q5VWM5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.28■■□□□ 1.16
PRAMEF9Q5VWM5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRAMEF9Q5VWM5 KRT18P24-201ENST00000344739 1156 ntBASIC22.28■■□□□ 1.16
PRAMEF9Q5VWM5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRAMEF9Q5VWM5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.27■■□□□ 1.16
PRAMEF9Q5VWM5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRAMEF9Q5VWM5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PRAMEF9Q5VWM5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PRAMEF9Q5VWM5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRAMEF9Q5VWM5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PRAMEF9Q5VWM5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 KRT8P33-201ENST00000508125 1423 ntBASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PRAMEF9Q5VWM5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PRAMEF9Q5VWM5 AF131216.4-201ENST00000638924 1588 ntBASIC22.25■■□□□ 1.15
PRAMEF9Q5VWM5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PRAMEF9Q5VWM5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PRAMEF9Q5VWM5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 AC103724.3-201ENST00000564481 992 ntBASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 MIR4281-201ENST00000580852 62 ntBASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 AC131274.2-201ENST00000580697 1507 ntBASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF9Q5VWM5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.23■■□□□ 1.15
PRAMEF9Q5VWM5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 THA1P-201ENST00000590384 1145 ntBASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF9Q5VWM5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.21■■□□□ 1.15
PRAMEF9Q5VWM5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.21■■□□□ 1.15
PRAMEF9Q5VWM5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PRAMEF9Q5VWM5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.21■■□□□ 1.15
PRAMEF9Q5VWM5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms