Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CBWD3Q5JTY5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CBWD3Q5JTY5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.06■■□□□ 1.6
CBWD3Q5JTY5 KRT18P24-201ENST00000344739 1156 ntBASIC25.06■■□□□ 1.6
CBWD3Q5JTY5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CBWD3Q5JTY5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CBWD3Q5JTY5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CBWD3Q5JTY5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CBWD3Q5JTY5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.03■■□□□ 1.6
CBWD3Q5JTY5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.03■■□□□ 1.6
CBWD3Q5JTY5 AC103724.3-201ENST00000564481 992 ntBASIC25.03■■□□□ 1.6
CBWD3Q5JTY5 MIR4281-201ENST00000580852 62 ntBASIC25.03■■□□□ 1.6
CBWD3Q5JTY5 THA1P-201ENST00000590384 1145 ntBASIC25.03■■□□□ 1.6
CBWD3Q5JTY5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CBWD3Q5JTY5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CBWD3Q5JTY5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.02■■□□□ 1.6
CBWD3Q5JTY5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CBWD3Q5JTY5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CBWD3Q5JTY5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CBWD3Q5JTY5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25■■□□□ 1.59
CBWD3Q5JTY5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CBWD3Q5JTY5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CBWD3Q5JTY5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CBWD3Q5JTY5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25■■□□□ 1.59
CBWD3Q5JTY5 AF131216.4-201ENST00000638924 1588 ntBASIC25■■□□□ 1.59
CBWD3Q5JTY5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CBWD3Q5JTY5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CBWD3Q5JTY5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CBWD3Q5JTY5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CBWD3Q5JTY5 YBX1P4-201ENST00000392794 808 ntBASIC24.99■■□□□ 1.59
CBWD3Q5JTY5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CBWD3Q5JTY5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
CBWD3Q5JTY5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.97■■□□□ 1.59
CBWD3Q5JTY5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CBWD3Q5JTY5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CBWD3Q5JTY5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CBWD3Q5JTY5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CBWD3Q5JTY5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CBWD3Q5JTY5 AC131274.2-201ENST00000580697 1507 ntBASIC24.96■■□□□ 1.59
CBWD3Q5JTY5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CBWD3Q5JTY5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
CBWD3Q5JTY5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CBWD3Q5JTY5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.96■■□□□ 1.59
CBWD3Q5JTY5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CBWD3Q5JTY5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CBWD3Q5JTY5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CBWD3Q5JTY5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CBWD3Q5JTY5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CBWD3Q5JTY5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.93■■□□□ 1.58
CBWD3Q5JTY5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CBWD3Q5JTY5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CBWD3Q5JTY5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CBWD3Q5JTY5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CBWD3Q5JTY5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms