Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC14.64□□□□□ -0.07
HSPG2P98160 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HSPG2P98160 TERF1P2-201ENST00000583350 1212 ntBASIC14.64□□□□□ -0.07
HSPG2P98160 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.64□□□□□ -0.07
HSPG2P98160 AC099791.2-201ENST00000605725 427 ntBASIC14.64□□□□□ -0.07
HSPG2P98160 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.63□□□□□ -0.07
HSPG2P98160 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
HSPG2P98160 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.63□□□□□ -0.07
HSPG2P98160 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HSPG2P98160 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.63□□□□□ -0.07
HSPG2P98160 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HSPG2P98160 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HSPG2P98160 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 FOXO3B-201ENST00000395675 1928 ntBASIC14.63□□□□□ -0.07
HSPG2P98160 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HSPG2P98160 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HSPG2P98160 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.63□□□□□ -0.07
HSPG2P98160 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
HSPG2P98160 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.62□□□□□ -0.07
HSPG2P98160 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.62□□□□□ -0.07
HSPG2P98160 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.62□□□□□ -0.07
HSPG2P98160 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.62□□□□□ -0.07
HSPG2P98160 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HSPG2P98160 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.62□□□□□ -0.07
HSPG2P98160 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HSPG2P98160 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HSPG2P98160 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.62□□□□□ -0.07
HSPG2P98160 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.62□□□□□ -0.07
HSPG2P98160 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
HSPG2P98160 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HSPG2P98160 C17orf82-201ENST00000623772 1530 ntBASIC14.61□□□□□ -0.07
HSPG2P98160 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HSPG2P98160 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HSPG2P98160 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HSPG2P98160 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HSPG2P98160 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.61□□□□□ -0.07
HSPG2P98160 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.61□□□□□ -0.07
HSPG2P98160 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.61□□□□□ -0.07
HSPG2P98160 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.61□□□□□ -0.07
HSPG2P98160 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HSPG2P98160 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.61□□□□□ -0.07
HSPG2P98160 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.61□□□□□ -0.07
HSPG2P98160 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.61□□□□□ -0.07
HSPG2P98160 AL358852.1-201ENST00000623174 1268 ntBASIC14.6□□□□□ -0.07
HSPG2P98160 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HSPG2P98160 PROC-203ENST00000409048 1586 ntTSL 5 BASIC14.6□□□□□ -0.07
HSPG2P98160 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HSPG2P98160 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.6□□□□□ -0.07
HSPG2P98160 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HSPG2P98160 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.6□□□□□ -0.07
HSPG2P98160 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HSPG2P98160 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HSPG2P98160 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HSPG2P98160 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HSPG2P98160 AC006015.1-201ENST00000429970 570 ntBASIC14.59□□□□□ -0.07
HSPG2P98160 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC14.59□□□□□ -0.07
HSPG2P98160 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HSPG2P98160 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
HSPG2P98160 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HSPG2P98160 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.59□□□□□ -0.07
HSPG2P98160 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.59□□□□□ -0.07
HSPG2P98160 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HSPG2P98160 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HSPG2P98160 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HSPG2P98160 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.59□□□□□ -0.07
HSPG2P98160 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.59□□□□□ -0.07
HSPG2P98160 AC005703.6-201ENST00000623265 1329 ntBASIC14.59□□□□□ -0.07
HSPG2P98160 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.58□□□□□ -0.07
HSPG2P98160 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
HSPG2P98160 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.58□□□□□ -0.08
HSPG2P98160 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.58□□□□□ -0.08
HSPG2P98160 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.58□□□□□ -0.08
HSPG2P98160 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.58□□□□□ -0.08
HSPG2P98160 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.58□□□□□ -0.08
HSPG2P98160 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HSPG2P98160 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.58□□□□□ -0.08
HSPG2P98160 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HSPG2P98160 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC14.57□□□□□ -0.08
HSPG2P98160 CROCCP5-201ENST00000436658 830 ntBASIC14.57□□□□□ -0.08
HSPG2P98160 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.57□□□□□ -0.08
HSPG2P98160 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HSPG2P98160 KRT18P14-201ENST00000534205 1250 ntBASIC14.57□□□□□ -0.08
HSPG2P98160 AC009102.2-201ENST00000606772 1639 ntBASIC14.57□□□□□ -0.08
HSPG2P98160 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HSPG2P98160 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms