Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NKX6-1P78426 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NKX6-1P78426 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.24■□□□□ 0.83
NKX6-1P78426 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NKX6-1P78426 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX6-1P78426 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NKX6-1P78426 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.23■□□□□ 0.83
NKX6-1P78426 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.23■□□□□ 0.83
NKX6-1P78426 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.23■□□□□ 0.83
NKX6-1P78426 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX6-1P78426 AC110285.6-201ENST00000617652 491 ntBASIC20.23■□□□□ 0.83
NKX6-1P78426 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX6-1P78426 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKX6-1P78426 AC096631.2-201ENST00000436136 790 ntBASIC20.22■□□□□ 0.83
NKX6-1P78426 MIR4281-201ENST00000580852 62 ntBASIC20.22■□□□□ 0.83
NKX6-1P78426 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NKX6-1P78426 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKX6-1P78426 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NKX6-1P78426 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.22■□□□□ 0.83
NKX6-1P78426 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NKX6-1P78426 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKX6-1P78426 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.22■□□□□ 0.83
NKX6-1P78426 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.21■□□□□ 0.83
NKX6-1P78426 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
NKX6-1P78426 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.21■□□□□ 0.83
NKX6-1P78426 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.21■□□□□ 0.83
NKX6-1P78426 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKX6-1P78426 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.21■□□□□ 0.83
NKX6-1P78426 MIR3621-201ENST00000580529 85 ntBASIC20.21■□□□□ 0.83
NKX6-1P78426 MTDHP2-201ENST00000601468 714 ntBASIC20.21■□□□□ 0.83
NKX6-1P78426 AL356740.2-201ENST00000601559 647 ntBASIC20.21■□□□□ 0.83
NKX6-1P78426 MIR6724-1-201ENST00000616420 92 ntBASIC20.21■□□□□ 0.83
NKX6-1P78426 MIR6724-2-201ENST00000616483 92 ntBASIC20.21■□□□□ 0.83
NKX6-1P78426 MIR6724-4-201ENST00000617390 92 ntBASIC20.21■□□□□ 0.83
NKX6-1P78426 MIR6724-3-201ENST00000622482 92 ntBASIC20.21■□□□□ 0.83
NKX6-1P78426 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.21■□□□□ 0.83
NKX6-1P78426 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.21■□□□□ 0.83
NKX6-1P78426 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX6-1P78426 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX6-1P78426 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX6-1P78426 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NKX6-1P78426 SLC6A10P-202ENST00000431994 2058 ntBASIC20.2■□□□□ 0.82
NKX6-1P78426 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX6-1P78426 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NKX6-1P78426 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX6-1P78426 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.2■□□□□ 0.82
NKX6-1P78426 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
NKX6-1P78426 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.19■□□□□ 0.82
NKX6-1P78426 AC090877.2-201ENST00000558441 1738 ntBASIC20.19■□□□□ 0.82
NKX6-1P78426 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.19■□□□□ 0.82
NKX6-1P78426 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX6-1P78426 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NKX6-1P78426 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NKX6-1P78426 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX6-1P78426 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NKX6-1P78426 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX6-1P78426 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NKX6-1P78426 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX6-1P78426 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX6-1P78426 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX6-1P78426 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX6-1P78426 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.17■□□□□ 0.82
NKX6-1P78426 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NKX6-1P78426 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NKX6-1P78426 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.17■□□□□ 0.82
NKX6-1P78426 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.17■□□□□ 0.82
NKX6-1P78426 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.17■□□□□ 0.82
NKX6-1P78426 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX6-1P78426 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NKX6-1P78426 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX6-1P78426 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX6-1P78426 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NKX6-1P78426 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.16■□□□□ 0.82
NKX6-1P78426 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NKX6-1P78426 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.16■□□□□ 0.82
NKX6-1P78426 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.16■□□□□ 0.82
NKX6-1P78426 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NKX6-1P78426 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NKX6-1P78426 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NKX6-1P78426 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.16■□□□□ 0.82
NKX6-1P78426 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKX6-1P78426 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX6-1P78426 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.15■□□□□ 0.82
NKX6-1P78426 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
NKX6-1P78426 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKX6-1P78426 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX6-1P78426 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX6-1P78426 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NKX6-1P78426 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.15■□□□□ 0.82
NKX6-1P78426 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.15■□□□□ 0.82
NKX6-1P78426 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX6-1P78426 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX6-1P78426 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.14■□□□□ 0.81
NKX6-1P78426 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NKX6-1P78426 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.14■□□□□ 0.81
NKX6-1P78426 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
NKX6-1P78426 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.14■□□□□ 0.81
NKX6-1P78426 AC133561.4-201ENST00000566112 224 ntBASIC20.14■□□□□ 0.81
NKX6-1P78426 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.14■□□□□ 0.81
NKX6-1P78426 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms