Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM6P62312 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.3■□□□□ 0.84
LSM6P62312 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LSM6P62312 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM6P62312 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM6P62312 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
LSM6P62312 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.29■□□□□ 0.84
LSM6P62312 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.29■□□□□ 0.84
LSM6P62312 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.29■□□□□ 0.84
LSM6P62312 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
LSM6P62312 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.29■□□□□ 0.84
LSM6P62312 AL033527.3-201ENST00000566366 1196 ntBASIC20.29■□□□□ 0.84
LSM6P62312 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LSM6P62312 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LSM6P62312 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM6P62312 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM6P62312 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.29■□□□□ 0.84
LSM6P62312 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM6P62312 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSM6P62312 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM6P62312 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSM6P62312 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSM6P62312 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.28■□□□□ 0.84
LSM6P62312 AC120024.1-201ENST00000562672 995 ntBASIC20.28■□□□□ 0.84
LSM6P62312 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.28■□□□□ 0.84
LSM6P62312 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
LSM6P62312 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.28■□□□□ 0.84
LSM6P62312 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSM6P62312 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LSM6P62312 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LSM6P62312 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM6P62312 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.27■□□□□ 0.84
LSM6P62312 MIR4508-201ENST00000584178 70 ntBASIC20.27■□□□□ 0.84
LSM6P62312 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM6P62312 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM6P62312 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LSM6P62312 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LSM6P62312 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LSM6P62312 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM6P62312 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSM6P62312 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM6P62312 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM6P62312 AL022069.1-201ENST00000568025 1636 ntBASIC20.26■□□□□ 0.83
LSM6P62312 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LSM6P62312 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM6P62312 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM6P62312 THA1P-201ENST00000590384 1145 ntBASIC20.25■□□□□ 0.83
LSM6P62312 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.25■□□□□ 0.83
LSM6P62312 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM6P62312 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM6P62312 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LSM6P62312 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM6P62312 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM6P62312 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM6P62312 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.24■□□□□ 0.83
LSM6P62312 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM6P62312 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LSM6P62312 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.24■□□□□ 0.83
LSM6P62312 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.24■□□□□ 0.83
LSM6P62312 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.24■□□□□ 0.83
LSM6P62312 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.24■□□□□ 0.83
LSM6P62312 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.24■□□□□ 0.83
LSM6P62312 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM6P62312 ABCB10P4-201ENST00000566803 2184 ntBASIC20.24■□□□□ 0.83
LSM6P62312 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM6P62312 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LSM6P62312 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM6P62312 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LSM6P62312 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM6P62312 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM6P62312 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.23■□□□□ 0.83
LSM6P62312 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LSM6P62312 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM6P62312 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.23■□□□□ 0.83
LSM6P62312 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.23■□□□□ 0.83
LSM6P62312 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM6P62312 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LSM6P62312 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM6P62312 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.22■□□□□ 0.83
LSM6P62312 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM6P62312 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.22■□□□□ 0.83
LSM6P62312 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM6P62312 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.22■□□□□ 0.83
LSM6P62312 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.22■□□□□ 0.83
LSM6P62312 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
LSM6P62312 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM6P62312 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM6P62312 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LSM6P62312 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM6P62312 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.22■□□□□ 0.83
LSM6P62312 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.22■□□□□ 0.83
LSM6P62312 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM6P62312 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.21■□□□□ 0.83
LSM6P62312 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM6P62312 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
LSM6P62312 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.21■□□□□ 0.83
LSM6P62312 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.21■□□□□ 0.83
LSM6P62312 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LSM6P62312 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM6P62312 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms