Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN6P29350 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PTPN6P29350 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN6P29350 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PTPN6P29350 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN6P29350 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN6P29350 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN6P29350 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN6P29350 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN6P29350 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.95■■□□□ 1.1
PTPN6P29350 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.95■■□□□ 1.1
PTPN6P29350 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN6P29350 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.94■■□□□ 1.1
PTPN6P29350 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN6P29350 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN6P29350 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN6P29350 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PTPN6P29350 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN6P29350 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN6P29350 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN6P29350 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.93■■□□□ 1.1
PTPN6P29350 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.93■■□□□ 1.1
PTPN6P29350 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN6P29350 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.93■■□□□ 1.1
PTPN6P29350 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.93■■□□□ 1.1
PTPN6P29350 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN6P29350 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN6P29350 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.92■■□□□ 1.1
PTPN6P29350 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.92■■□□□ 1.1
PTPN6P29350 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN6P29350 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN6P29350 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN6P29350 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.91■■□□□ 1.1
PTPN6P29350 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PTPN6P29350 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.91■■□□□ 1.1
PTPN6P29350 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.91■■□□□ 1.1
PTPN6P29350 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PTPN6P29350 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN6P29350 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN6P29350 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN6P29350 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN6P29350 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
PTPN6P29350 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN6P29350 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.9■■□□□ 1.1
PTPN6P29350 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.9■■□□□ 1.1
PTPN6P29350 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN6P29350 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN6P29350 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PTPN6P29350 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN6P29350 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN6P29350 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN6P29350 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN6P29350 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PTPN6P29350 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN6P29350 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
PTPN6P29350 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
PTPN6P29350 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN6P29350 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PTPN6P29350 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN6P29350 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN6P29350 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
PTPN6P29350 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN6P29350 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN6P29350 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
PTPN6P29350 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.88■■□□□ 1.09
PTPN6P29350 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN6P29350 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN6P29350 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.88■■□□□ 1.09
PTPN6P29350 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN6P29350 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN6P29350 AC139795.1-202ENST00000500444 432 ntBASIC21.87■■□□□ 1.09
PTPN6P29350 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN6P29350 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN6P29350 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN6P29350 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN6P29350 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN6P29350 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN6P29350 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN6P29350 BHLHE23-202ENST00000612929 1109 ntBASIC21.86■■□□□ 1.09
PTPN6P29350 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN6P29350 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.86■■□□□ 1.09
PTPN6P29350 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN6P29350 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN6P29350 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN6P29350 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN6P29350 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN6P29350 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN6P29350 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.85■■□□□ 1.09
PTPN6P29350 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.85■■□□□ 1.09
PTPN6P29350 RPS2P7-201ENST00000447334 885 ntBASIC21.85■■□□□ 1.09
PTPN6P29350 AC074183.2-201ENST00000623112 922 ntBASIC21.85■■□□□ 1.09
PTPN6P29350 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.85■■□□□ 1.09
PTPN6P29350 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN6P29350 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN6P29350 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN6P29350 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
PTPN6P29350 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN6P29350 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN6P29350 AC087393.1-201ENST00000582896 145 ntBASIC21.84■■□□□ 1.09
PTPN6P29350 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms