Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 SKI6YGR195W 741 nt5.82□□□□□ -1.48
MSH1P25846 YJL215CYJL215C 360 nt5.82□□□□□ -1.48
MSH1P25846 SHP1YBL058W 1272 nt5.82□□□□□ -1.48
MSH1P25846 MDY2YOL111C 639 nt5.82□□□□□ -1.48
MSH1P25846 ARR1YPR199C 885 nt5.82□□□□□ -1.48
MSH1P25846 snR34snR34 203 nt5.82□□□□□ -1.48
MSH1P25846 PRT1YOR361C 2292 nt5.82□□□□□ -1.48
MSH1P25846 YNL095CYNL095C 1929 nt5.82□□□□□ -1.48
MSH1P25846 DAL81YIR023W 2913 nt5.81□□□□□ -1.48
MSH1P25846 SEM1YDR363W-A 270 nt5.81□□□□□ -1.48
MSH1P25846 BUB3YOR026W 1026 nt5.81□□□□□ -1.48
MSH1P25846 STE12YHR084W 2067 nt5.81□□□□□ -1.48
MSH1P25846 NFI1YOR156C 2181 nt5.8□□□□□ -1.48
MSH1P25846 SLT2YHR030C 1455 nt5.8□□□□□ -1.48
MSH1P25846 LSM6YDR378C 261 nt5.8□□□□□ -1.48
MSH1P25846 PRS2YER099C 957 nt5.8□□□□□ -1.48
MSH1P25846 MRF1YGL143C 1242 nt5.8□□□□□ -1.48
MSH1P25846 VAM7YGL212W 951 nt5.8□□□□□ -1.48
MSH1P25846 YLR402WYLR402W 192 nt5.8□□□□□ -1.48
MSH1P25846 MFA2YNL145W 117 nt5.8□□□□□ -1.48
MSH1P25846 ARG8YOL140W 1272 nt5.8□□□□□ -1.48
MSH1P25846 CAM1YPL048W 1248 nt5.8□□□□□ -1.48
MSH1P25846 PPR1YLR014C 2715 nt5.8□□□□□ -1.48
MSH1P25846 INO2YDR123C 915 nt5.79□□□□□ -1.48
MSH1P25846 YHP1YDR451C 1062 nt5.79□□□□□ -1.48
MSH1P25846 YGL262WYGL262W 528 nt5.79□□□□□ -1.48
MSH1P25846 EGD2YHR193C 525 nt5.79□□□□□ -1.48
MSH1P25846 YOR289WYOR289W 756 nt5.79□□□□□ -1.48
MSH1P25846 BUL1YMR275C 2931 nt5.79□□□□□ -1.48
MSH1P25846 VPS36YLR417W 1701 nt5.79□□□□□ -1.48
MSH1P25846 ECM3YOR092W 1842 nt5.78□□□□□ -1.48
MSH1P25846 GSH2YOL049W 1476 nt5.78□□□□□ -1.48
MSH1P25846 FHL1YPR104C 2811 nt5.78□□□□□ -1.48
MSH1P25846 MED2YDL005C 1296 nt5.78□□□□□ -1.48
MSH1P25846 DFM1YDR411C 1026 nt5.78□□□□□ -1.48
MSH1P25846 RML2YEL050C 1182 nt5.78□□□□□ -1.48
MSH1P25846 YGR066CYGR066C 879 nt5.78□□□□□ -1.48
MSH1P25846 YMR086C-AYMR086C-A 339 nt5.78□□□□□ -1.48
MSH1P25846 APM2YHL019C 1818 nt5.78□□□□□ -1.48
MSH1P25846 MNS1YJR131W 1650 nt5.78□□□□□ -1.48
MSH1P25846 MIF2YKL089W 1650 nt5.78□□□□□ -1.48
MSH1P25846 PHO90YJL198W 2646 nt5.78□□□□□ -1.48
MSH1P25846 ACF2YLR144C 2340 nt5.77□□□□□ -1.49
MSH1P25846 YDL114WYDL114W 927 nt5.77□□□□□ -1.49
MSH1P25846 ERV14YGL054C 417 nt5.77□□□□□ -1.49
MSH1P25846 MSA2YKR077W 1092 nt5.77□□□□□ -1.49
MSH1P25846 PSR1YLL010C 1284 nt5.77□□□□□ -1.49
MSH1P25846 YMR114CYMR114C 1107 nt5.77□□□□□ -1.49
MSH1P25846 YBR056C-BYBR056C-B 159 nt5.77□□□□□ -1.49
MSH1P25846 SET4YJL105W 1683 nt5.77□□□□□ -1.49
MSH1P25846 CTS1YLR286C 1689 nt5.76□□□□□ -1.49
MSH1P25846 VMA16YHR026W 642 nt5.76□□□□□ -1.49
MSH1P25846 VPS1YKR001C 2115 nt5.76□□□□□ -1.49
MSH1P25846 FES1YBR101C 873 nt5.76□□□□□ -1.49
MSH1P25846 PDE1YGL248W 1110 nt5.75□□□□□ -1.49
MSH1P25846 YKL107WYKL107W 930 nt5.75□□□□□ -1.49
MSH1P25846 YKL169CYKL169C 384 nt5.75□□□□□ -1.49
MSH1P25846 AAD15YOL165C 432 nt5.75□□□□□ -1.49
MSH1P25846 TEF1YPR080W 1377 nt5.75□□□□□ -1.49
MSH1P25846 TEF2YBR118W 1377 nt5.75□□□□□ -1.49
MSH1P25846 IXR1YKL032C 1794 nt5.75□□□□□ -1.49
MSH1P25846 MAL13YGR288W 1422 nt5.74□□□□□ -1.49
MSH1P25846 MCH4YOL119C 1506 nt5.74□□□□□ -1.49
MSH1P25846 HRP1YOL123W 1605 nt5.74□□□□□ -1.49
MSH1P25846 EXO1YOR033C 2109 nt5.74□□□□□ -1.49
MSH1P25846 YDL172CYDL172C 480 nt5.74□□□□□ -1.49
MSH1P25846 PFA5YDR459C 1125 nt5.74□□□□□ -1.49
MSH1P25846 PHM8YER037W 966 nt5.74□□□□□ -1.49
MSH1P25846 EDC1YGL222C 528 nt5.74□□□□□ -1.49
MSH1P25846 RRP4YHR069C 1080 nt5.74□□□□□ -1.49
MSH1P25846 SOL1YNR034W 966 nt5.74□□□□□ -1.49
MSH1P25846 YBR144CYBR144C 315 nt5.74□□□□□ -1.49
MSH1P25846 MPP10YJR002W 1782 nt5.74□□□□□ -1.49
MSH1P25846 GIP1YBR045C 1920 nt5.74□□□□□ -1.49
MSH1P25846 MCX1YBR227C 1563 nt5.73□□□□□ -1.49
MSH1P25846 RSM10YDR041W 612 nt5.73□□□□□ -1.49
MSH1P25846 YGR176WYGR176W 348 nt5.73□□□□□ -1.49
MSH1P25846 DBP8YHR169W 1296 nt5.73□□□□□ -1.49
MSH1P25846 SPO7YAL009W 780 nt5.73□□□□□ -1.49
MSH1P25846 ADD66YKL206C 804 nt5.73□□□□□ -1.49
MSH1P25846 YPL062WYPL062W 405 nt5.73□□□□□ -1.49
MSH1P25846 RPS9AYPL081W 594 nt5.73□□□□□ -1.49
MSH1P25846 UBP9YER098W 2265 nt5.73□□□□□ -1.49
MSH1P25846 PAL1YDR348C 1500 nt5.73□□□□□ -1.49
MSH1P25846 CTS2YDR371W 1536 nt5.73□□□□□ -1.49
MSH1P25846 UTP7YER082C 1665 nt5.72□□□□□ -1.49
MSH1P25846 SMP1YBR182C 1359 nt5.72□□□□□ -1.49
MSH1P25846 PWP1YLR196W 1731 nt5.72□□□□□ -1.49
MSH1P25846 SYF2YGR129W 648 nt5.72□□□□□ -1.49
MSH1P25846 YHR214WYHR214W 612 nt5.72□□□□□ -1.49
MSH1P25846 UIP3YAR027W 708 nt5.72□□□□□ -1.49
MSH1P25846 YAR066WYAR066W 612 nt5.72□□□□□ -1.49
MSH1P25846 CTR3YLR411W 726 nt5.72□□□□□ -1.49
MSH1P25846 YNL143CYNL143C 393 nt5.72□□□□□ -1.49
MSH1P25846 YNL234WYNL234W 1281 nt5.72□□□□□ -1.49
MSH1P25846 LEM3YNL323W 1245 nt5.72□□□□□ -1.49
MSH1P25846 ATG12YBR217W 561 nt5.72□□□□□ -1.49
MSH1P25846 VAN1YML115C 1608 nt5.72□□□□□ -1.49
MSH1P25846 GCR2YNL199C 1605 nt5.72□□□□□ -1.49
MSH1P25846 MRK1YDL079C 1506 nt5.72□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms