Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP24386 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP24386 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP24386 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP24386 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP24386 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP24386 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP24386 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHMP24386 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP24386 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP24386 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.52■■□□□ 1.04
CHMP24386 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP24386 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP24386 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.52■■□□□ 1.04
CHMP24386 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP24386 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CHMP24386 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CHMP24386 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CHMP24386 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CHMP24386 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP24386 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP24386 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP24386 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP24386 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP24386 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP24386 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP24386 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CHMP24386 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP24386 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP24386 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP24386 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMP24386 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.5■■□□□ 1.03
CHMP24386 AC022616.5-201ENST00000518796 181 ntBASIC21.5■■□□□ 1.03
CHMP24386 AC103834.1-201ENST00000520383 144 ntBASIC21.5■■□□□ 1.03
CHMP24386 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP24386 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP24386 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CHMP24386 AC004812.2-201ENST00000611079 2094 ntBASIC21.49■■□□□ 1.03
CHMP24386 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMP24386 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CHMP24386 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHMP24386 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP24386 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CHMP24386 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP24386 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.49■■□□□ 1.03
CHMP24386 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP24386 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP24386 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP24386 KRT8P33-201ENST00000508125 1423 ntBASIC21.48■■□□□ 1.03
CHMP24386 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP24386 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP24386 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP24386 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP24386 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP24386 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP24386 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP24386 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CHMP24386 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CHMP24386 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP24386 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP24386 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CHMP24386 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP24386 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHMP24386 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.46■■□□□ 1.03
CHMP24386 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.46■■□□□ 1.03
CHMP24386 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP24386 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.46■■□□□ 1.03
CHMP24386 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP24386 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
CHMP24386 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP24386 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP24386 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.45■■□□□ 1.02
CHMP24386 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP24386 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.45■■□□□ 1.02
CHMP24386 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CHMP24386 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.45■■□□□ 1.02
CHMP24386 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP24386 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHMP24386 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP24386 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP24386 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP24386 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CHMP24386 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP24386 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP24386 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP24386 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHMP24386 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.44■■□□□ 1.02
CHMP24386 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.44■■□□□ 1.02
CHMP24386 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.44■■□□□ 1.02
CHMP24386 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CHMP24386 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP24386 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHMP24386 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.43■■□□□ 1.02
CHMP24386 DUSP8P5-201ENST00000422884 1815 ntBASIC21.43■■□□□ 1.02
CHMP24386 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHMP24386 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHMP24386 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHMP24386 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.43■■□□□ 1.02
CHMP24386 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.43■■□□□ 1.02
CHMP24386 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms