Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.37■□□□□ 0.85
MSR1P21757 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.37■□□□□ 0.85
MSR1P21757 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.37■□□□□ 0.85
MSR1P21757 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MSR1P21757 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MSR1P21757 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MSR1P21757 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSR1P21757 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSR1P21757 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
MSR1P21757 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MSR1P21757 AC120024.1-201ENST00000562672 995 ntBASIC20.36■□□□□ 0.85
MSR1P21757 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSR1P21757 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSR1P21757 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSR1P21757 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MSR1P21757 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.36■□□□□ 0.85
MSR1P21757 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSR1P21757 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MSR1P21757 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSR1P21757 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSR1P21757 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MSR1P21757 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSR1P21757 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
MSR1P21757 AC004812.2-201ENST00000611079 2094 ntBASIC20.34■□□□□ 0.85
MSR1P21757 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSR1P21757 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSR1P21757 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
MSR1P21757 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
MSR1P21757 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.34■□□□□ 0.85
MSR1P21757 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSR1P21757 THA1P-201ENST00000590384 1145 ntBASIC20.34■□□□□ 0.85
MSR1P21757 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
MSR1P21757 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSR1P21757 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSR1P21757 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MSR1P21757 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.33■□□□□ 0.85
MSR1P21757 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSR1P21757 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSR1P21757 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSR1P21757 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSR1P21757 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSR1P21757 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSR1P21757 KRT18P24-201ENST00000344739 1156 ntBASIC20.33■□□□□ 0.85
MSR1P21757 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.33■□□□□ 0.85
MSR1P21757 MIR4508-201ENST00000584178 70 ntBASIC20.33■□□□□ 0.85
MSR1P21757 AL161729.1-201ENST00000604104 1402 ntBASIC20.33■□□□□ 0.84
MSR1P21757 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MSR1P21757 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MSR1P21757 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
MSR1P21757 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MSR1P21757 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.33■□□□□ 0.84
MSR1P21757 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MSR1P21757 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSR1P21757 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSR1P21757 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.32■□□□□ 0.84
MSR1P21757 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MSR1P21757 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSR1P21757 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.32■□□□□ 0.84
MSR1P21757 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
MSR1P21757 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.32■□□□□ 0.84
MSR1P21757 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSR1P21757 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.32■□□□□ 0.84
MSR1P21757 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSR1P21757 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSR1P21757 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MSR1P21757 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
MSR1P21757 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSR1P21757 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.31■□□□□ 0.84
MSR1P21757 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
MSR1P21757 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSR1P21757 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.31■□□□□ 0.84
MSR1P21757 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MSR1P21757 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MSR1P21757 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSR1P21757 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSR1P21757 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSR1P21757 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
MSR1P21757 YBX1P4-201ENST00000392794 808 ntBASIC20.3■□□□□ 0.84
MSR1P21757 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSR1P21757 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.3■□□□□ 0.84
MSR1P21757 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSR1P21757 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MSR1P21757 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.29■□□□□ 0.84
MSR1P21757 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSR1P21757 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSR1P21757 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.29■□□□□ 0.84
MSR1P21757 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSR1P21757 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
MSR1P21757 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSR1P21757 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.29■□□□□ 0.84
MSR1P21757 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSR1P21757 KRT8P33-201ENST00000508125 1423 ntBASIC20.28■□□□□ 0.84
MSR1P21757 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MSR1P21757 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSR1P21757 AL022069.1-201ENST00000568025 1636 ntBASIC20.28■□□□□ 0.84
MSR1P21757 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MSR1P21757 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MSR1P21757 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSR1P21757 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSR1P21757 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms