Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
HIST1H1DP16402 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1DP16402 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.58■□□□□ 0.73
HIST1H1DP16402 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H1DP16402 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H1DP16402 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.58■□□□□ 0.72
HIST1H1DP16402 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H1DP16402 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST1H1DP16402 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST1H1DP16402 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.57■□□□□ 0.72
HIST1H1DP16402 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HIST1H1DP16402 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H1DP16402 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1DP16402 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HIST1H1DP16402 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1DP16402 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1DP16402 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1DP16402 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1DP16402 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1DP16402 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HIST1H1DP16402 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.56■□□□□ 0.72
HIST1H1DP16402 RAP2CP1-202ENST00000605179 643 ntBASIC19.56■□□□□ 0.72
HIST1H1DP16402 AC022413.1-201ENST00000624602 984 ntBASIC19.56■□□□□ 0.72
HIST1H1DP16402 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H1DP16402 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HIST1H1DP16402 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1DP16402 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1DP16402 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1DP16402 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1DP16402 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1DP16402 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
HIST1H1DP16402 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1DP16402 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1DP16402 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HIST1H1DP16402 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1DP16402 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H1DP16402 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HIST1H1DP16402 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HIST1H1DP16402 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HIST1H1DP16402 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1DP16402 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1DP16402 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1DP16402 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1DP16402 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1DP16402 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HIST1H1DP16402 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H1DP16402 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1DP16402 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1DP16402 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1DP16402 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1DP16402 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1DP16402 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HIST1H1DP16402 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1DP16402 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1DP16402 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST1H1DP16402 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.52■□□□□ 0.72
HIST1H1DP16402 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST1H1DP16402 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
HIST1H1DP16402 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1DP16402 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1DP16402 AC026202.3-201ENST00000600805 1127 ntBASIC19.52■□□□□ 0.72
HIST1H1DP16402 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HIST1H1DP16402 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
HIST1H1DP16402 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.52■□□□□ 0.71
HIST1H1DP16402 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1DP16402 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1DP16402 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1DP16402 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1DP16402 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HIST1H1DP16402 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1DP16402 AL117328.2-201ENST00000624617 1940 ntBASIC19.51■□□□□ 0.71
HIST1H1DP16402 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1DP16402 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HIST1H1DP16402 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1DP16402 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.5■□□□□ 0.71
HIST1H1DP16402 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1DP16402 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1DP16402 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms