Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
UBL4AP11441 AC141586.4-201ENST00000624558 1573 ntBASIC21.29■■□□□ 1
UBL4AP11441 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
UBL4AP11441 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBL4AP11441 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.29■■□□□ 1
UBL4AP11441 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.29■■□□□ 1
UBL4AP11441 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.28■■□□□ 1
UBL4AP11441 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.28■■□□□ 1
UBL4AP11441 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBL4AP11441 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBL4AP11441 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
UBL4AP11441 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBL4AP11441 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
UBL4AP11441 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBL4AP11441 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.28■■□□□ 1
UBL4AP11441 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBL4AP11441 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBL4AP11441 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBL4AP11441 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
UBL4AP11441 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBL4AP11441 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBL4AP11441 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBL4AP11441 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBL4AP11441 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.27■■□□□ 1
UBL4AP11441 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
UBL4AP11441 MIR4508-201ENST00000584178 70 ntBASIC21.27■■□□□ 1
UBL4AP11441 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
UBL4AP11441 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
UBL4AP11441 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBL4AP11441 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.26■□□□□ 0.99
UBL4AP11441 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.26■□□□□ 0.99
UBL4AP11441 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBL4AP11441 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBL4AP11441 AC120024.1-201ENST00000562672 995 ntBASIC21.26■□□□□ 0.99
UBL4AP11441 THA1P-201ENST00000590384 1145 ntBASIC21.26■□□□□ 0.99
UBL4AP11441 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.26■□□□□ 0.99
UBL4AP11441 KRT8P33-201ENST00000508125 1423 ntBASIC21.26■□□□□ 0.99
UBL4AP11441 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBL4AP11441 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.26■□□□□ 0.99
UBL4AP11441 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBL4AP11441 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
UBL4AP11441 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.25■□□□□ 0.99
UBL4AP11441 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBL4AP11441 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
UBL4AP11441 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
UBL4AP11441 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBL4AP11441 YBX1P4-201ENST00000392794 808 ntBASIC21.25■□□□□ 0.99
UBL4AP11441 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBL4AP11441 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.25■□□□□ 0.99
UBL4AP11441 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBL4AP11441 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.24■□□□□ 0.99
UBL4AP11441 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 KRT18P24-201ENST00000344739 1156 ntBASIC21.24■□□□□ 0.99
UBL4AP11441 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.24■□□□□ 0.99
UBL4AP11441 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.24■□□□□ 0.99
UBL4AP11441 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.24■□□□□ 0.99
UBL4AP11441 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBL4AP11441 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBL4AP11441 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBL4AP11441 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBL4AP11441 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBL4AP11441 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBL4AP11441 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBL4AP11441 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBL4AP11441 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBL4AP11441 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.22■□□□□ 0.99
UBL4AP11441 AC103834.1-201ENST00000520383 144 ntBASIC21.22■□□□□ 0.99
UBL4AP11441 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
UBL4AP11441 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBL4AP11441 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBL4AP11441 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBL4AP11441 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBL4AP11441 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBL4AP11441 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBL4AP11441 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.21■□□□□ 0.99
UBL4AP11441 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
UBL4AP11441 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBL4AP11441 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
UBL4AP11441 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
UBL4AP11441 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
UBL4AP11441 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBL4AP11441 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
UBL4AP11441 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBL4AP11441 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBL4AP11441 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBL4AP11441 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBL4AP11441 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBL4AP11441 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.2■□□□□ 0.98
UBL4AP11441 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
UBL4AP11441 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBL4AP11441 MIR4281-201ENST00000580852 62 ntBASIC21.19■□□□□ 0.98
UBL4AP11441 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBL4AP11441 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms