Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.24■□□□□ 0.99
SMIM18P0DKX4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM18P0DKX4 AC073130.3-201ENST00000624389 2278 ntBASIC21.24■□□□□ 0.99
SMIM18P0DKX4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM18P0DKX4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.22■□□□□ 0.99
SMIM18P0DKX4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM18P0DKX4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.22■□□□□ 0.99
SMIM18P0DKX4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.22■□□□□ 0.99
SMIM18P0DKX4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM18P0DKX4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM18P0DKX4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM18P0DKX4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM18P0DKX4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM18P0DKX4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.21■□□□□ 0.99
SMIM18P0DKX4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM18P0DKX4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMIM18P0DKX4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 MIR6090-201ENST00000622481 60 ntBASIC21.2■□□□□ 0.98
SMIM18P0DKX4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMIM18P0DKX4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 AC092068.2-201ENST00000590491 1708 ntBASIC21.19■□□□□ 0.98
SMIM18P0DKX4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM18P0DKX4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMIM18P0DKX4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM18P0DKX4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SMIM18P0DKX4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SMIM18P0DKX4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SMIM18P0DKX4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM18P0DKX4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM18P0DKX4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 AC108673.1-201ENST00000510422 1159 ntBASIC21.15■□□□□ 0.98
SMIM18P0DKX4 SETD8P1-201ENST00000623146 1180 ntBASIC21.15■□□□□ 0.98
SMIM18P0DKX4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 AC242852.2-201ENST00000615738 1807 ntBASIC21.15■□□□□ 0.98
SMIM18P0DKX4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM18P0DKX4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM18P0DKX4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM18P0DKX4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SMIM18P0DKX4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
SMIM18P0DKX4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM18P0DKX4 CAHM-201ENST00000604200 896 ntBASIC21.14■□□□□ 0.97
SMIM18P0DKX4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM18P0DKX4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM18P0DKX4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms