Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HOXC6P09630 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.4■■□□□ 1.82
HOXC6P09630 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.4■■□□□ 1.82
HOXC6P09630 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.4■■□□□ 1.82
HOXC6P09630 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.4■■□□□ 1.82
HOXC6P09630 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
HOXC6P09630 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.39■■□□□ 1.82
HOXC6P09630 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HOXC6P09630 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
HOXC6P09630 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
HOXC6P09630 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
HOXC6P09630 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
HOXC6P09630 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
HOXC6P09630 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
HOXC6P09630 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
HOXC6P09630 ERN1-208ENST00000606895 2068 ntBASIC26.38■■□□□ 1.81
HOXC6P09630 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HOXC6P09630 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
HOXC6P09630 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
HOXC6P09630 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
HOXC6P09630 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
HOXC6P09630 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.37■■□□□ 1.81
HOXC6P09630 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
HOXC6P09630 AC091305.1-201ENST00000479476 895 ntBASIC26.37■■□□□ 1.81
HOXC6P09630 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.37■■□□□ 1.81
HOXC6P09630 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
HOXC6P09630 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HOXC6P09630 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HOXC6P09630 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HOXC6P09630 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.36■■□□□ 1.81
HOXC6P09630 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.36■■□□□ 1.81
HOXC6P09630 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.36■■□□□ 1.81
HOXC6P09630 AC092171.4-201ENST00000609130 632 ntBASIC26.36■■□□□ 1.81
HOXC6P09630 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.36■■□□□ 1.81
HOXC6P09630 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HOXC6P09630 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HOXC6P09630 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.36■■□□□ 1.81
HOXC6P09630 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HOXC6P09630 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HOXC6P09630 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC6P09630 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC6P09630 MIR6821-201ENST00000617625 74 ntBASIC26.35■■□□□ 1.81
HOXC6P09630 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC6P09630 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC6P09630 SYT6-210ENST00000641643 1587 ntBASIC26.34■■□□□ 1.81
HOXC6P09630 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.34■■□□□ 1.81
HOXC6P09630 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
HOXC6P09630 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.34■■□□□ 1.81
HOXC6P09630 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC6P09630 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
HOXC6P09630 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC6P09630 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
HOXC6P09630 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.32■■□□□ 1.8
HOXC6P09630 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.32■■□□□ 1.8
HOXC6P09630 MIR4767-201ENST00000582827 78 ntBASIC26.32■■□□□ 1.8
HOXC6P09630 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HOXC6P09630 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HOXC6P09630 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HOXC6P09630 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.32■■□□□ 1.8
HOXC6P09630 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
HOXC6P09630 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC6P09630 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC6P09630 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC6P09630 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.31■■□□□ 1.8
HOXC6P09630 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.31■■□□□ 1.8
HOXC6P09630 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.31■■□□□ 1.8
HOXC6P09630 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC6P09630 AC010501.1-201ENST00000606270 1962 ntBASIC26.31■■□□□ 1.8
HOXC6P09630 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC6P09630 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC6P09630 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.31■■□□□ 1.8
HOXC6P09630 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.31■■□□□ 1.8
HOXC6P09630 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HOXC6P09630 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HOXC6P09630 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.3■■□□□ 1.8
HOXC6P09630 AC097381.1-201ENST00000429019 1296 ntBASIC26.3■■□□□ 1.8
HOXC6P09630 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.3■■□□□ 1.8
HOXC6P09630 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.3■■□□□ 1.8
HOXC6P09630 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.29■■□□□ 1.8
HOXC6P09630 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
HOXC6P09630 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HOXC6P09630 RASA4CP-201ENST00000424092 1398 ntBASIC26.29■■□□□ 1.8
HOXC6P09630 SERBP1P1-201ENST00000396021 1160 ntBASIC26.28■■□□□ 1.8
HOXC6P09630 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.28■■□□□ 1.8
HOXC6P09630 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.28■■□□□ 1.8
HOXC6P09630 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.28■■□□□ 1.8
HOXC6P09630 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HOXC6P09630 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
HOXC6P09630 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
HOXC6P09630 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
HOXC6P09630 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
HOXC6P09630 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.27■■□□□ 1.8
HOXC6P09630 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.27■■□□□ 1.8
HOXC6P09630 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms