Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPB1P04440 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPB1P04440 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DPB1P04440 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DPB1P04440 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DPB1P04440 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DPB1P04440 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
HLA-DPB1P04440 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DPB1P04440 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HLA-DPB1P04440 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DPB1P04440 AL117328.2-201ENST00000624617 1940 ntBASIC20.64■□□□□ 0.89
HLA-DPB1P04440 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
HLA-DPB1P04440 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DPB1P04440 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 AC026202.3-201ENST00000600805 1127 ntBASIC20.63■□□□□ 0.89
HLA-DPB1P04440 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPB1P04440 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPB1P04440 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 AC133552.2-201ENST00000619106 1032 ntBASIC20.61■□□□□ 0.89
HLA-DPB1P04440 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DPB1P04440 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 AC009831.1-201ENST00000580420 1582 ntBASIC20.6■□□□□ 0.89
HLA-DPB1P04440 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DPB1P04440 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 RAP2CP1-202ENST00000605179 643 ntBASIC20.59■□□□□ 0.89
HLA-DPB1P04440 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPB1P04440 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DPB1P04440 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DPB1P04440 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HLA-DPB1P04440 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HLA-DPB1P04440 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DPB1P04440 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DPB1P04440 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPB1P04440 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPB1P04440 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPB1P04440 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPB1P04440 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPB1P04440 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPB1P04440 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DPB1P04440 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPB1P04440 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DPB1P04440 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPB1P04440 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPB1P04440 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPB1P04440 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPB1P04440 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms