Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LTAP01374 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
LTAP01374 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LTAP01374 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LTAP01374 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
LTAP01374 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LTAP01374 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 AL157400.5-201ENST00000507624 621 ntBASIC17.39■□□□□ 0.37
LTAP01374 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.39■□□□□ 0.37
LTAP01374 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LTAP01374 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LTAP01374 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LTAP01374 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 FOXO3B-201ENST00000395675 1928 ntBASIC17.39■□□□□ 0.37
LTAP01374 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LTAP01374 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LTAP01374 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.38■□□□□ 0.37
LTAP01374 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LTAP01374 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LTAP01374 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LTAP01374 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
LTAP01374 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LTAP01374 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.38■□□□□ 0.37
LTAP01374 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LTAP01374 DUSP8P3-201ENST00000399571 1760 ntBASIC17.38■□□□□ 0.37
LTAP01374 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LTAP01374 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LTAP01374 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LTAP01374 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.37■□□□□ 0.37
LTAP01374 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LTAP01374 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LTAP01374 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LTAP01374 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LTAP01374 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LTAP01374 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LTAP01374 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LTAP01374 AC092068.2-201ENST00000590491 1708 ntBASIC17.36■□□□□ 0.37
LTAP01374 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LTAP01374 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LTAP01374 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.36■□□□□ 0.37
LTAP01374 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.36■□□□□ 0.37
LTAP01374 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.36■□□□□ 0.37
LTAP01374 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LTAP01374 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LTAP01374 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LTAP01374 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LTAP01374 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LTAP01374 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LTAP01374 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LTAP01374 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LTAP01374 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LTAP01374 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.34■□□□□ 0.37
LTAP01374 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.34■□□□□ 0.37
LTAP01374 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.34■□□□□ 0.37
LTAP01374 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.34■□□□□ 0.37
LTAP01374 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.34■□□□□ 0.37
LTAP01374 C1orf229-201ENST00000623686 2258 ntBASIC17.34■□□□□ 0.37
LTAP01374 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
LTAP01374 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LTAP01374 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LTAP01374 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LTAP01374 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.33■□□□□ 0.37
LTAP01374 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LTAP01374 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.33■□□□□ 0.36
LTAP01374 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.33■□□□□ 0.36
LTAP01374 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LTAP01374 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LTAP01374 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.33■□□□□ 0.36
LTAP01374 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LTAP01374 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LTAP01374 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LTAP01374 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.32■□□□□ 0.36
LTAP01374 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.32■□□□□ 0.36
LTAP01374 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LTAP01374 LINC00526-201ENST00000581067 1875 ntBASIC17.32■□□□□ 0.36
LTAP01374 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms