Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 CA15P2-201ENST00000611168 834 ntBASIC22.16■■□□□ 1.14
MT-CO3P00414 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.16■■□□□ 1.14
MT-CO3P00414 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO3P00414 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
MT-CO3P00414 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.16■■□□□ 1.14
MT-CO3P00414 ERN1-208ENST00000606895 2068 ntBASIC22.16■■□□□ 1.14
MT-CO3P00414 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO3P00414 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO3P00414 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO3P00414 RASA4CP-201ENST00000424092 1398 ntBASIC22.15■■□□□ 1.14
MT-CO3P00414 SERBP1P1-201ENST00000396021 1160 ntBASIC22.15■■□□□ 1.14
MT-CO3P00414 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.15■■□□□ 1.14
MT-CO3P00414 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
MT-CO3P00414 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO3P00414 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO3P00414 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
MT-CO3P00414 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
MT-CO3P00414 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
MT-CO3P00414 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
MT-CO3P00414 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.14■■□□□ 1.13
MT-CO3P00414 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO3P00414 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO3P00414 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO3P00414 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.13■■□□□ 1.13
MT-CO3P00414 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
MT-CO3P00414 AC087623.3-201ENST00000607047 1098 ntBASIC22.13■■□□□ 1.13
MT-CO3P00414 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO3P00414 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO3P00414 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO3P00414 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO3P00414 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
MT-CO3P00414 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.12■■□□□ 1.13
MT-CO3P00414 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO3P00414 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.12■■□□□ 1.13
MT-CO3P00414 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.12■■□□□ 1.13
MT-CO3P00414 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.12■■□□□ 1.13
MT-CO3P00414 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-CO3P00414 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-CO3P00414 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-CO3P00414 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MT-CO3P00414 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-CO3P00414 AC099791.2-201ENST00000605725 427 ntBASIC22.11■■□□□ 1.13
MT-CO3P00414 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
MT-CO3P00414 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-CO3P00414 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
MT-CO3P00414 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
MT-CO3P00414 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-CO3P00414 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-CO3P00414 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MT-CO3P00414 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.1■■□□□ 1.13
MT-CO3P00414 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.1■■□□□ 1.13
MT-CO3P00414 AC027682.1-201ENST00000562846 899 ntBASIC22.1■■□□□ 1.13
MT-CO3P00414 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
MT-CO3P00414 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MT-CO3P00414 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
MT-CO3P00414 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
MT-CO3P00414 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-CO3P00414 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-CO3P00414 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.09■■□□□ 1.13
MT-CO3P00414 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.09■■□□□ 1.13
MT-CO3P00414 AL162430.1-201ENST00000480705 870 ntBASIC22.09■■□□□ 1.13
MT-CO3P00414 AC008764.7-201ENST00000593779 1081 ntBASIC22.09■■□□□ 1.13
MT-CO3P00414 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.09■■□□□ 1.13
MT-CO3P00414 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MT-CO3P00414 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MT-CO3P00414 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MT-CO3P00414 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.08■■□□□ 1.13
MT-CO3P00414 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MT-CO3P00414 AL138724.1-201ENST00000606771 1088 ntBASIC22.08■■□□□ 1.13
MT-CO3P00414 AC011298.3-201ENST00000615796 283 ntBASIC22.08■■□□□ 1.13
MT-CO3P00414 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MT-CO3P00414 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MT-CO3P00414 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
MT-CO3P00414 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.07■■□□□ 1.12
MT-CO3P00414 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
MT-CO3P00414 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MT-CO3P00414 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
MT-CO3P00414 IRS3P-201ENST00000223076 1006 ntBASIC22.07■■□□□ 1.12
MT-CO3P00414 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MT-CO3P00414 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MT-CO3P00414 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.07■■□□□ 1.12
MT-CO3P00414 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.07■■□□□ 1.12
MT-CO3P00414 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.07■■□□□ 1.12
MT-CO3P00414 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.07■■□□□ 1.12
MT-CO3P00414 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.07■■□□□ 1.12
MT-CO3P00414 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MT-CO3P00414 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
MT-CO3P00414 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MT-CO3P00414 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
MT-CO3P00414 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MT-CO3P00414 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
MT-CO3P00414 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms