Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.64■□□□□ 0.89
UBL3O95164 AC010980.1-201ENST00000587192 1142 ntBASIC20.64■□□□□ 0.89
UBL3O95164 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.64■□□□□ 0.89
UBL3O95164 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBL3O95164 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBL3O95164 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.63■□□□□ 0.89
UBL3O95164 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.63■□□□□ 0.89
UBL3O95164 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.63■□□□□ 0.89
UBL3O95164 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
UBL3O95164 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL3O95164 DUSP8P5-201ENST00000422884 1815 ntBASIC20.62■□□□□ 0.89
UBL3O95164 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.62■□□□□ 0.89
UBL3O95164 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBL3O95164 AC022616.5-201ENST00000518796 181 ntBASIC20.62■□□□□ 0.89
UBL3O95164 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL3O95164 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL3O95164 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL3O95164 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.62■□□□□ 0.89
UBL3O95164 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL3O95164 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBL3O95164 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL3O95164 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL3O95164 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL3O95164 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UBL3O95164 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL3O95164 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBL3O95164 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
UBL3O95164 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.61■□□□□ 0.89
UBL3O95164 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UBL3O95164 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL3O95164 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.6■□□□□ 0.89
UBL3O95164 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL3O95164 AC141586.4-201ENST00000624558 1573 ntBASIC20.6■□□□□ 0.89
UBL3O95164 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBL3O95164 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBL3O95164 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL3O95164 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
UBL3O95164 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.6■□□□□ 0.89
UBL3O95164 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
UBL3O95164 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL3O95164 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
UBL3O95164 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL3O95164 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL3O95164 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL3O95164 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL3O95164 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL3O95164 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBL3O95164 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL3O95164 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.58■□□□□ 0.89
UBL3O95164 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.58■□□□□ 0.89
UBL3O95164 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL3O95164 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
UBL3O95164 SLC6A10P-202ENST00000431994 2058 ntBASIC20.58■□□□□ 0.88
UBL3O95164 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBL3O95164 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBL3O95164 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBL3O95164 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBL3O95164 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL3O95164 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBL3O95164 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.57■□□□□ 0.88
UBL3O95164 PVT1_1.1-201ENST00000615125 194 ntBASIC20.57■□□□□ 0.88
UBL3O95164 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL3O95164 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL3O95164 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.57■□□□□ 0.88
UBL3O95164 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
UBL3O95164 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBL3O95164 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 YBX1P4-201ENST00000392794 808 ntBASIC20.55■□□□□ 0.88
UBL3O95164 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
UBL3O95164 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.55■□□□□ 0.88
UBL3O95164 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 MIR4508-201ENST00000584178 70 ntBASIC20.55■□□□□ 0.88
UBL3O95164 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.55■□□□□ 0.88
UBL3O95164 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UBL3O95164 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.55■□□□□ 0.88
UBL3O95164 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL3O95164 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBL3O95164 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBL3O95164 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBL3O95164 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBL3O95164 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms