Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
RFPL1O75677 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL1O75677 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.19■■□□□ 1.3
RFPL1O75677 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL1O75677 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL1O75677 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.19■■□□□ 1.3
RFPL1O75677 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RFPL1O75677 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL1O75677 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.19■■□□□ 1.3
RFPL1O75677 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
RFPL1O75677 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.19■■□□□ 1.3
RFPL1O75677 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL1O75677 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RFPL1O75677 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL1O75677 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL1O75677 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RFPL1O75677 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL1O75677 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL1O75677 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
RFPL1O75677 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL1O75677 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL1O75677 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL1O75677 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
RFPL1O75677 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL1O75677 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL1O75677 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL1O75677 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL1O75677 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.17■■□□□ 1.3
RFPL1O75677 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL1O75677 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL1O75677 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 AC026202.3-201ENST00000600805 1127 ntBASIC23.16■■□□□ 1.3
RFPL1O75677 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 C9orf163-202ENST00000624034 2573 ntBASIC23.16■■□□□ 1.3
RFPL1O75677 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL1O75677 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.15■■□□□ 1.3
RFPL1O75677 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RFPL1O75677 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.15■■□□□ 1.3
RFPL1O75677 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.14■■□□□ 1.3
RFPL1O75677 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.14■■□□□ 1.29
RFPL1O75677 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFPL1O75677 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFPL1O75677 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.14■■□□□ 1.29
RFPL1O75677 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFPL1O75677 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFPL1O75677 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.13■■□□□ 1.29
RFPL1O75677 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL1O75677 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL1O75677 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.13■■□□□ 1.29
RFPL1O75677 AL035685.1-201ENST00000636663 812 ntBASIC23.13■■□□□ 1.29
RFPL1O75677 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL1O75677 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RFPL1O75677 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RFPL1O75677 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.12■■□□□ 1.29
RFPL1O75677 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL1O75677 KRT18P10-201ENST00000388836 1287 ntBASIC23.12■■□□□ 1.29
RFPL1O75677 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL1O75677 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.12■■□□□ 1.29
RFPL1O75677 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL1O75677 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.12■■□□□ 1.29
RFPL1O75677 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.11■■□□□ 1.29
RFPL1O75677 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.11■■□□□ 1.29
RFPL1O75677 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.11■■□□□ 1.29
RFPL1O75677 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFPL1O75677 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
RFPL1O75677 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFPL1O75677 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFPL1O75677 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RFPL1O75677 BHLHE23-202ENST00000612929 1109 ntBASIC23.1■■□□□ 1.29
RFPL1O75677 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
RFPL1O75677 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFPL1O75677 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL1O75677 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL1O75677 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RFPL1O75677 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL1O75677 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.09■■□□□ 1.29
RFPL1O75677 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RFPL1O75677 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RFPL1O75677 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.09■■□□□ 1.29
RFPL1O75677 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL1O75677 DUX4L9-201ENST00000449051 1259 ntBASIC23.09■■□□□ 1.29
RFPL1O75677 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL1O75677 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.09■■□□□ 1.29
RFPL1O75677 AL451085.2-201ENST00000605085 799 ntBASIC23.09■■□□□ 1.29
RFPL1O75677 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RFPL1O75677 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RFPL1O75677 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.08■■□□□ 1.29
RFPL1O75677 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RFPL1O75677 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RFPL1O75677 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.08■■□□□ 1.29
RFPL1O75677 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
RFPL1O75677 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RFPL1O75677 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL1O75677 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms