Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
NDUFS3O75489 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
NDUFS3O75489 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NDUFS3O75489 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.99■■□□□ 1.27
NDUFS3O75489 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.99■■□□□ 1.27
NDUFS3O75489 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
NDUFS3O75489 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NDUFS3O75489 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
NDUFS3O75489 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
NDUFS3O75489 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NDUFS3O75489 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NDUFS3O75489 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.99■■□□□ 1.27
NDUFS3O75489 AC004812.2-201ENST00000611079 2094 ntBASIC22.99■■□□□ 1.27
NDUFS3O75489 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NDUFS3O75489 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NDUFS3O75489 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NDUFS3O75489 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NDUFS3O75489 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.98■■□□□ 1.27
NDUFS3O75489 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NDUFS3O75489 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NDUFS3O75489 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NDUFS3O75489 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NDUFS3O75489 KRT18P24-201ENST00000344739 1156 ntBASIC22.97■■□□□ 1.27
NDUFS3O75489 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NDUFS3O75489 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NDUFS3O75489 THA1P-201ENST00000590384 1145 ntBASIC22.97■■□□□ 1.27
NDUFS3O75489 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NDUFS3O75489 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NDUFS3O75489 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NDUFS3O75489 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NDUFS3O75489 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NDUFS3O75489 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.96■■□□□ 1.27
NDUFS3O75489 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
NDUFS3O75489 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
NDUFS3O75489 MIR4508-201ENST00000584178 70 ntBASIC22.96■■□□□ 1.27
NDUFS3O75489 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NDUFS3O75489 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
NDUFS3O75489 KRT8P33-201ENST00000508125 1423 ntBASIC22.95■■□□□ 1.26
NDUFS3O75489 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.95■■□□□ 1.26
NDUFS3O75489 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NDUFS3O75489 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.95■■□□□ 1.26
NDUFS3O75489 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NDUFS3O75489 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.94■■□□□ 1.26
NDUFS3O75489 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
NDUFS3O75489 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 YBX1P4-201ENST00000392794 808 ntBASIC22.94■■□□□ 1.26
NDUFS3O75489 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NDUFS3O75489 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NDUFS3O75489 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.93■■□□□ 1.26
NDUFS3O75489 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NDUFS3O75489 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.93■■□□□ 1.26
NDUFS3O75489 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
NDUFS3O75489 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NDUFS3O75489 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NDUFS3O75489 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.93■■□□□ 1.26
NDUFS3O75489 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.93■■□□□ 1.26
NDUFS3O75489 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NDUFS3O75489 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.92■■□□□ 1.26
NDUFS3O75489 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NDUFS3O75489 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.92■■□□□ 1.26
NDUFS3O75489 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.92■■□□□ 1.26
NDUFS3O75489 AC103834.1-201ENST00000520383 144 ntBASIC22.92■■□□□ 1.26
NDUFS3O75489 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.92■■□□□ 1.26
NDUFS3O75489 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.92■■□□□ 1.26
NDUFS3O75489 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.92■■□□□ 1.26
NDUFS3O75489 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NDUFS3O75489 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
NDUFS3O75489 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
NDUFS3O75489 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NDUFS3O75489 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.91■■□□□ 1.26
NDUFS3O75489 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NDUFS3O75489 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
NDUFS3O75489 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NDUFS3O75489 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
NDUFS3O75489 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
NDUFS3O75489 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
NDUFS3O75489 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NDUFS3O75489 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.9■■□□□ 1.26
NDUFS3O75489 ABCB10P4-201ENST00000566803 2184 ntBASIC22.9■■□□□ 1.26
NDUFS3O75489 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.9■■□□□ 1.26
NDUFS3O75489 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
NDUFS3O75489 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
NDUFS3O75489 AL161729.1-201ENST00000604104 1402 ntBASIC22.9■■□□□ 1.26
NDUFS3O75489 AL022069.1-201ENST00000568025 1636 ntBASIC22.9■■□□□ 1.26
NDUFS3O75489 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NDUFS3O75489 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NDUFS3O75489 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms