Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 KRT16P3-201ENST00000439127 1283 ntBASIC21.69■■□□□ 1.06
PRAMEF2O60811 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.69■■□□□ 1.06
PRAMEF2O60811 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF2O60811 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.69■■□□□ 1.06
PRAMEF2O60811 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF2O60811 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF2O60811 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF2O60811 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF2O60811 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF2O60811 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PRAMEF2O60811 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF2O60811 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF2O60811 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF2O60811 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.67■■□□□ 1.06
PRAMEF2O60811 TSPY9P-201ENST00000440215 945 ntBASIC21.67■■□□□ 1.06
PRAMEF2O60811 TSPY11P-201ENST00000442607 1045 ntBASIC21.67■■□□□ 1.06
PRAMEF2O60811 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF2O60811 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF2O60811 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF2O60811 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF2O60811 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
PRAMEF2O60811 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF2O60811 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF2O60811 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF2O60811 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF2O60811 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF2O60811 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF2O60811 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF2O60811 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.65■■□□□ 1.06
PRAMEF2O60811 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF2O60811 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF2O60811 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF2O60811 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF2O60811 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRAMEF2O60811 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF2O60811 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF2O60811 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.64■■□□□ 1.05
PRAMEF2O60811 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.64■■□□□ 1.05
PRAMEF2O60811 AC092028.1-203ENST00000608262 953 ntBASIC21.64■■□□□ 1.05
PRAMEF2O60811 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.64■■□□□ 1.05
PRAMEF2O60811 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.64■■□□□ 1.05
PRAMEF2O60811 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF2O60811 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PRAMEF2O60811 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF2O60811 AL139125.2-201ENST00000623134 1869 ntBASIC21.64■■□□□ 1.05
PRAMEF2O60811 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.64■■□□□ 1.05
PRAMEF2O60811 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEF2O60811 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF2O60811 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.63■■□□□ 1.05
PRAMEF2O60811 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEF2O60811 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.63■■□□□ 1.05
PRAMEF2O60811 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF2O60811 HLA-L-211ENST00000482052 1765 ntBASIC21.63■■□□□ 1.05
PRAMEF2O60811 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PRAMEF2O60811 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF2O60811 AC008406.3-201ENST00000620001 1374 ntBASIC21.62■■□□□ 1.05
PRAMEF2O60811 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF2O60811 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF2O60811 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF2O60811 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF2O60811 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF2O60811 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF2O60811 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF2O60811 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.61■■□□□ 1.05
PRAMEF2O60811 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.61■■□□□ 1.05
PRAMEF2O60811 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF2O60811 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF2O60811 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF2O60811 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF2O60811 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF2O60811 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF2O60811 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
PRAMEF2O60811 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PRAMEF2O60811 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.6■■□□□ 1.05
PRAMEF2O60811 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PRAMEF2O60811 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF2O60811 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
PRAMEF2O60811 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.6■■□□□ 1.05
PRAMEF2O60811 AC019069.1-201ENST00000610008 1333 ntBASIC21.59■■□□□ 1.05
PRAMEF2O60811 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.59■■□□□ 1.05
PRAMEF2O60811 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF2O60811 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.59■■□□□ 1.05
PRAMEF2O60811 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF2O60811 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PRAMEF2O60811 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF2O60811 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF2O60811 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRAMEF2O60811 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRAMEF2O60811 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PRAMEF2O60811 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.58■■□□□ 1.05
PRAMEF2O60811 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.58■■□□□ 1.05
PRAMEF2O60811 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms