Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
TRAF3IP2O43734 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP2O43734 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.6■□□□□ 0.89
TRAF3IP2O43734 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP2O43734 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP2O43734 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF3IP2O43734 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP2O43734 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP2O43734 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAF3IP2O43734 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP2O43734 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP2O43734 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP2O43734 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAF3IP2O43734 AC004812.2-201ENST00000611079 2094 ntBASIC20.58■□□□□ 0.89
TRAF3IP2O43734 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAF3IP2O43734 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF3IP2O43734 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAF3IP2O43734 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP2O43734 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP2O43734 AF131216.4-201ENST00000638924 1588 ntBASIC20.58■□□□□ 0.88
TRAF3IP2O43734 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAF3IP2O43734 AL031848.2-201ENST00000607670 837 ntBASIC20.57■□□□□ 0.88
TRAF3IP2O43734 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF3IP2O43734 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 RARRES2P1-201ENST00000474487 481 ntBASIC20.55■□□□□ 0.88
TRAF3IP2O43734 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP2O43734 AL161729.1-201ENST00000604104 1402 ntBASIC20.54■□□□□ 0.88
TRAF3IP2O43734 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 AC131274.2-201ENST00000580697 1507 ntBASIC20.54■□□□□ 0.88
TRAF3IP2O43734 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP2O43734 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP2O43734 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP2O43734 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP2O43734 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP2O43734 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP2O43734 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAF3IP2O43734 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
TRAF3IP2O43734 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRAF3IP2O43734 AL022069.1-201ENST00000568025 1636 ntBASIC20.52■□□□□ 0.88
TRAF3IP2O43734 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRAF3IP2O43734 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAF3IP2O43734 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms